CI: add additional tests in commands section #55

	# This file is automatically generated by busywork.qiime2.org and
	# template-repos - any manual edits made to this file will be erased when
	# busywork performs maintenance updates.

	name: ci

	on:
	pull_request:
	push:
	branches:
	- master

	jobs:
	lint:
	runs-on: ubuntu-latest
	steps:
	- name: checkout source
	uses: actions/checkout@v2

	- name: set up python 3.8
	uses: actions/setup-python@v1
	with:
	python-version: 3.8

	- name: install dependencies
	run: python -m pip install --upgrade pip

	- name: lint
	run: \|
	pip install -q https://github.com/qiime2/q2lint/archive/master.zip
	q2lint
	pip install -q flake8
	flake8

	build-and-test:
	needs: lint
	strategy:
	matrix:
	os: [ubuntu-latest, macos-latest]
	runs-on: ${{ matrix.os }}
	steps:
	- name: checkout source
	uses: actions/checkout@v2
	with:
	fetch-depth: 0

	- name: set up git repo for versioneer
	run: git fetch --depth=1 origin +refs/tags/:refs/tags/

	- uses: qiime2/action-library-packaging@alpha1
	with:
	package-name: q2-alignment
	build-target: dev
	additional-tests: py.test --pyargs q2_alignment
	library-token: ${{ secrets.LIBRARY_TOKEN }}

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