Name		Name	Last commit message	Last commit date
Latest commit History 20 Commits
.RData		.RData
.Rhistory		.Rhistory
Extract_SNP_Flanking_Sequence.py		Extract_SNP_Flanking_Sequence.py
HLF_transform_z-score.R		HLF_transform_z-score.R
InitialSteps.R		InitialSteps.R
Kurtosis_skew.R		Kurtosis_skew.R
ModelForPE.R		ModelForPE.R
NucleotideFreq.java		NucleotideFreq.java
README.md		README.md
SNP_flank_seq_and_dbSNP_format.py		SNP_flank_seq_and_dbSNP_format.py
bedtogff.py		bedtogff.py
combine_mRNA_Meth_bygenes.py		combine_mRNA_Meth_bygenes.py
corr_tcga_meth_mrna.R		corr_tcga_meth_mrna.R
deseq2.R		deseq2.R
df_Hippo_gene.py		df_Hippo_gene.py
df_lines_prg.R		df_lines_prg.R
eucl.R		eucl.R
extract_paired_singletons_reads.py		extract_paired_singletons_reads.py
fasta.R		fasta.R
forward_backward_BW_algo.py		forward_backward_BW_algo.py
generate_kmer.py		generate_kmer.py
generate_unique_kmer_wRange.py		generate_unique_kmer_wRange.py
geo_analysis.R		geo_analysis.R
geo_anylsis.R		geo_anylsis.R
go_hyperG_entrez.R		go_hyperG_entrez.R
interact.R		interact.R
kegg_pathway.R		kegg_pathway.R
merged_data_by_col.R		merged_data_by_col.R
noiseq.R		noiseq.R
non_coding_rna.py		non_coding_rna.py
non_coding_rna.py~		non_coding_rna.py~
pathway.R		pathway.R
pheatmap.R		pheatmap.R
plotMA.R		plotMA.R
random_graph.R		random_graph.R
reactome_pa_genes.R		reactome_pa_genes.R
remove_snp_in_repeats.py		remove_snp_in_repeats.py
rename_fasta_fastq_header_filename.py		rename_fasta_fastq_header_filename.py
slmdata.py		slmdata.py
splitting_fasta_file_pattern.py		splitting_fasta_file_pattern.py
string_db_run.R		string_db_run.R
subtype_classify.R		subtype_classify.R
toGO_fischer_entrez.R		toGO_fischer_entrez.R
trim_fastq_reads.py		trim_fastq_reads.py
tsne.R		tsne.R
vit.py		vit.py
vit_tf.py		vit_tf.py
vol.R		vol.R
volkanoPlot.R		volkanoPlot.R
wcgna.R		wcgna.R

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