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Missing File #37

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ilovesquishy opened this issue Jun 30, 2020 · 1 comment
Closed

Missing File #37

ilovesquishy opened this issue Jun 30, 2020 · 1 comment

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@ilovesquishy
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I was trying to run arcasHLA but received this error:
Traceback (most recent call last):
File "/home/yzx5896/.conda/envs/arcasHLA/bin/scripts/genotype.py", line 674, in
check_ref()
File "/home/yzx5896/.conda/envs/arcasHLA/bin/scripts/reference.py", line 80, in check_ref
build_convert(False)
File "/home/yzx5896/.conda/envs/arcasHLA/bin/scripts/reference.py", line 462, in build_convert
p_group = process_hla_nom(hla_nom_p)
File "/home/yzx5896/.conda/envs/arcasHLA/bin/scripts/reference.py", line 232, in process_hla_nom
for line in open(hla_nom, 'r', encoding='UTF-8'):
FileNotFoundError: [Errno 2] No such file or directory: '/home/yzx5896/.conda/envs/arcasHLA/bin/scripts/../dat/IMGTHLA/wmda/hla_nom_p.txt'

Where could I get the IMGTHLA/wmda/hla_nom_p.txt' file? I would appreciate your help.

@tpereachamblee
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Thank you for using our tool. Please see the explanation provided in issue #32.

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