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DicomFile.cs
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DicomFile.cs
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using System;
using System.IO;
using System.Text;
using Dicom.IO;
using Dicom.IO.Reader;
using Dicom.IO.Writer;
namespace Dicom {
public class DicomFile {
public DicomFile() {
FileMetaInfo = new DicomFileMetaInformation();
Dataset = new DicomDataset();
Format = DicomFileFormat.DICOM3;
}
public DicomFile(DicomDataset dataset) {
Dataset = dataset;
FileMetaInfo = new DicomFileMetaInformation(Dataset);
Format = DicomFileFormat.DICOM3;
}
public FileReference File {
get;
protected set;
}
public DicomFileFormat Format {
get;
protected set;
}
public DicomFileMetaInformation FileMetaInfo {
get;
protected set;
}
public DicomDataset Dataset {
get;
protected set;
}
protected virtual void OnSave() {
}
public void Save(string fileName) {
if (Format == DicomFileFormat.ACRNEMA1 || Format == DicomFileFormat.ACRNEMA2)
throw new DicomFileException(this, "Unable to save ACR-NEMA file");
if (Format == DicomFileFormat.DICOM3NoFileMetaInfo) {
// create file meta information from dataset
FileMetaInfo = new DicomFileMetaInformation(Dataset);
}
File = new FileReference(fileName);
File.Delete();
OnSave();
using (var target = new FileByteTarget(File)) {
DicomFileWriter writer = new DicomFileWriter(DicomWriteOptions.Default);
writer.Write(target, FileMetaInfo, Dataset);
}
}
public void Save(Stream stream) {
if (Format == DicomFileFormat.ACRNEMA1 || Format == DicomFileFormat.ACRNEMA2)
throw new DicomFileException(this, "Unable to save ACR-NEMA file");
if (Format == DicomFileFormat.DICOM3NoFileMetaInfo) {
// create file meta information from dataset
FileMetaInfo = new DicomFileMetaInformation(Dataset);
}
OnSave();
using (var target = new StreamByteTarget(stream)) {
DicomFileWriter writer = new DicomFileWriter(DicomWriteOptions.Default);
writer.Write(target, FileMetaInfo, Dataset);
}
}
public void BeginSave(string fileName, AsyncCallback callback, object state) {
if (Format == DicomFileFormat.ACRNEMA1 || Format == DicomFileFormat.ACRNEMA2)
throw new DicomFileException(this, "Unable to save ACR-NEMA file");
if (Format == DicomFileFormat.DICOM3NoFileMetaInfo) {
// create file meta information from dataset
FileMetaInfo = new DicomFileMetaInformation(Dataset);
}
File = new FileReference(fileName);
File.Delete();
OnSave();
FileByteTarget target = new FileByteTarget(File);
EventAsyncResult result = new EventAsyncResult(callback, state);
DicomFileWriter writer = new DicomFileWriter(DicomWriteOptions.Default);
writer.BeginWrite(target, FileMetaInfo, Dataset, OnWriteComplete, new Tuple<DicomFileWriter, EventAsyncResult>(writer, result));
}
private static void OnWriteComplete(IAsyncResult result) {
var state = result.AsyncState as Tuple<DicomFileWriter, EventAsyncResult>;
try {
state.Item1.EndWrite(result);
// ensure that file handles are closed
var target = (FileByteTarget)state.Item1.Target;
target.Dispose();
} catch (Exception ex) {
state.Item2.InternalState = ex;
}
state.Item2.Set();
}
public void EndSave(IAsyncResult result) {
EventAsyncResult eventResult = result as EventAsyncResult;
result.AsyncWaitHandle.WaitOne();
if (eventResult.InternalState != null)
throw eventResult.InternalState as Exception;
}
/// <summary>
/// Reads the specified filename and returns a DicomFile object. Note that the values for large
/// DICOM elements (e.g. PixelData) are read in "on demand" to conserve memory. Large DICOM elements
/// are determined by their size in bytes - see the default value for this in the FileByteSource._largeObjectSize
/// </summary>
/// <param name="fileName">The filename of the DICOM file</param>
/// <returns>DicomFile instance</returns>
public static DicomFile Open(string fileName) {
return Open(fileName, DicomEncoding.Default);
}
/// <summary>
/// Reads the specified filename and returns a DicomFile object. Note that the values for large
/// DICOM elements (e.g. PixelData) are read in "on demand" to conserve memory. Large DICOM elements
/// are determined by their size in bytes - see the default value for this in the FileByteSource._largeObjectSize
/// </summary>
/// <param name="fileName">The filename of the DICOM file</param>
/// <param name="fallbackEncoding">Encoding to apply when attribute Specific Character Set is not available.</param>
/// <returns>DicomFile instance</returns>
public static DicomFile Open(string fileName, Encoding fallbackEncoding) {
if (fallbackEncoding == null)
{
throw new ArgumentNullException("fallbackEncoding");
}
DicomFile df = new DicomFile();
try {
df.File = new FileReference(fileName);
using (var source = new FileByteSource(df.File)) {
DicomFileReader reader = new DicomFileReader();
reader.Read(source,
new DicomDatasetReaderObserver(df.FileMetaInfo),
new DicomDatasetReaderObserver(df.Dataset, fallbackEncoding));
df.Format = reader.FileFormat;
df.Dataset.InternalTransferSyntax = reader.Syntax;
return df;
}
} catch (Exception e) {
throw new DicomFileException(df, e.Message, e);
}
}
public static DicomFile Open(Stream stream)
{
return Open(stream, DicomEncoding.Default);
}
public static DicomFile Open(Stream stream, Encoding fallbackEncoding)
{
if (fallbackEncoding == null)
{
throw new ArgumentNullException("fallbackEncoding");
}
var df = new DicomFile();
try {
var source = new StreamByteSource(stream);
var reader = new DicomFileReader();
reader.Read(source,
new DicomDatasetReaderObserver(df.FileMetaInfo),
new DicomDatasetReaderObserver(df.Dataset, fallbackEncoding));
df.Format = reader.FileFormat;
df.Dataset.InternalTransferSyntax = reader.Syntax;
return df;
} catch (Exception e) {
throw new DicomFileException(df, e.Message, e);
}
}
public static IAsyncResult BeginOpen(string fileName, AsyncCallback callback, object state)
{
return BeginOpen(fileName, DicomEncoding.Default, callback, state);
}
public static IAsyncResult BeginOpen(string fileName, Encoding fallbackEncoding, AsyncCallback callback, object state)
{
DicomFile df = new DicomFile();
df.File = new FileReference(fileName);
FileByteSource source = new FileByteSource(df.File);
EventAsyncResult result = new EventAsyncResult(callback, state);
DicomFileReader reader = new DicomFileReader();
reader.BeginRead(source,
new DicomDatasetReaderObserver(df.FileMetaInfo),
new DicomDatasetReaderObserver(df.Dataset, fallbackEncoding),
OnReadComplete, new Tuple<DicomFileReader, DicomFile, EventAsyncResult>(reader, df, result));
return result;
}
private static void OnReadComplete(IAsyncResult result) {
var state = result.AsyncState as Tuple<DicomFileReader, DicomFile, EventAsyncResult>;
Exception e = null;
try {
state.Item1.EndRead(result);
// ensure that file handles are closed
var source = (FileByteSource)state.Item1.Source;
source.Dispose();
state.Item2.Format = state.Item1.FileFormat;
state.Item2.Dataset.InternalTransferSyntax = state.Item1.Syntax;
} catch (Exception ex) {
state.Item2.Format = state.Item1.FileFormat;
e = ex;
}
state.Item3.InternalState = new Tuple<DicomFile, Exception>(state.Item2, e);
state.Item3.Set();
}
public static DicomFile EndOpen(IAsyncResult result) {
result.AsyncWaitHandle.WaitOne();
EventAsyncResult eventResult = result as EventAsyncResult;
var state = eventResult.InternalState as Tuple<DicomFile, Exception>;
if (state.Item2 != null)
throw new DicomFileException(state.Item1, state.Item2.Message, state.Item2);
return state.Item1;
}
public override string ToString() {
return String.Format("DICOM File [{0}]", Format);
}
/// <summary>
/// Test if file has a valid preamble and DICOM 3.0 header.
/// </summary>
/// <param name="path">Path to file</param>
/// <returns>True if valid DICOM 3.0 file header is detected.</returns>
public static bool HasValidHeader(string path) {
try {
using (var fs = new FileStream(path, FileMode.Open, FileAccess.Read)) {
fs.Seek(128, SeekOrigin.Begin);
bool magic = false;
if (fs.ReadByte() == 'D' &&
fs.ReadByte() == 'I' &&
fs.ReadByte() == 'C' &&
fs.ReadByte() == 'M')
magic = true;
fs.Close();
return magic;
}
} catch {
return false;
}
}
}
}