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Updated changelog and made it into reverse order. More docs.
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josemduarte committed May 22, 2018
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98 changes: 61 additions & 37 deletions CHANGELOG.md
@@ -1,18 +1,61 @@
# Change Log
All notable changes to this project will be documented in this file, following the suggestions of [Keep a CHANGELOG](http://keepachangelog.com/). This project adheres to [Semantic Versioning](http://semver.org/).

## v0.1.0 - 2016-04-22
## v1.0.7 - 2017-06-15
### Changed
- The decoder now treats null strings as nulls, instead of "". Roundtrips of null strings would fail because of that.

## v1.0.6 - 2017-06-14
### Changed
- Fixed issues with reduced encoder

## v1.0.5 - 2017-03-28
### Changed
- Removed unnecessary ParseException introduced in 1.0.4

## v1.0.4 - 2017-03-28
### Changed
- Faster MessagePack reading - replaced Jackson (probably slow because of reflection) with manual construction of objects, Jackson is still available, but the new solution is the default
- Faster parsing - moved computation from slow GenericDecoder.getNumBonds into constructor, which was invisible to profiler, but made parsing about 4x faster

## v1.0.3 - 2016-09-13
### Added
- Initial release
- API functions to get the URL as a string and the data as an inputstream

## v0.1.1 - 2016-06-02
## v1.0.2 - 2016-08-29
### Changed
- Find max in empty int array now returns -1. Added a test to do so.
- Refactored some of the code to remove repitition
- Added private to several class level variables
- Added inter group saccharide bonds to the reduced format
- Cleanup of WriterUtils
- Updated version string in MmtfStructure
- Updated test data

## v1.0.1 - 2016-08-18
### Changed
- Added saccharides to the reduced format

## v1.0.0 - 2016-08-15
### Changed
- Updated to the URL to the v1.0 version

### Added
- Added a new reduced encoder to produce the reduced format of the data.
- API function to get a byte array from the URL

## v0.2.2 - 2016-07-05
### Changed
- Refactored the generation of Bioassemblies
- Refactored generateGroupMap to generateGroupList
- Update to the serialization module - only construct object mapper once

### Added
- getBioassemblyName added to the API - return the BioassemblyName as a string.
- Tests for EncoderUtils

## v0.2.1 - 2016-06-15
### Changed
- Bugfix for the Reduced encoder. Chain name list and chain id list are now transferred correctly.
- Update to the latest version of the dependencies
- Added package info for the codec project
- Improved docs and refactoring of test names

## v0.2.0 - 2016-06-03
### Added
Expand All @@ -35,44 +78,25 @@ All notable changes to this project will be documented in this file, following t
### Removed
- mmtf-encoder and mmtf-decoder modules

## v0.2.1 - 2016-06-15
## v0.1.1 - 2016-06-02
### Changed
- Bugfix for the Reduced encoder. Chain name list and chain id list are now transferred correctly.
- Update to the latest version of the dependencies
- Added package info for the codec project
- Improved docs and refactoring of test names
- Find max in empty int array now returns -1. Added a test to do so.
- Refactored some of the code to remove repitition
- Added private to several class level variables

### Added
- Added a new reduced encoder to produce the reduced format of the data.

## v0.1.0 - 2016-04-22
### Added
- Initial release

## v0.2.2 - 2016-07-05
### Changed
- Refactored the generation of Bioassemblies
- Refactored generateGroupMap to generateGroupList
- Update to the serialization module - only construct object mapper once

### Added
- getBioassemblyName added to the API - return the BioassemblyName as a string.
- Tests for EncoderUtils

## v1.0.0 - 2016-08-15
### Changed
- Updated to the URL to the v1.0 version

### Added
- API function to get a byte array from the URL


## v1.0.1 - 2016-08-18
### Changed
- Added saccharides to the reduced format


## v1.0.2 - 2016-08-29
### Changed
- Added inter group saccharide bonds to the reduced format
- Cleanup of WriterUtils
- Updated version string in MmtfStructure
- Updated test data


## v1.0.3 - 2016-09-13
### Added
- API functions to get the URL as a string and the data as an inputstream
3 changes: 2 additions & 1 deletion README.md
Expand Up @@ -66,5 +66,6 @@ Once you have a username and password add this to your `~/.m2/settings.xml` mave
<username>my_username</username>
<password>my_password</password>
</server>
```

```
Finally edit the release tag in github and update the CHANGELOG.md file.

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