Merge pull request #23 from reactome/develop

upgraded release
reactome · Feb 24, 2020 · 3ba0314 · 3ba0314
2 parents 4895004 + 091c613
commit 3ba0314
Show file tree

Hide file tree

Showing 37 changed files with 14,444 additions and 97 deletions.
diff --git a/docs/analysis.html b/docs/analysis.html
@@ -4,7 +4,7 @@
 <html xmlns="http://www.w3.org/1999/xhtml">
   <head>
     <meta charset="utf-8" />
-    <title>Analysis Service &#8212; reactome2py 0.0.8 documentation</title>
+    <title>Analysis Service &#8212; reactome2py 1.0.0 documentation</title>
     <link rel="stylesheet" href="static/alabaster.css" type="text/css" />
     <link rel="stylesheet" href="static/pygments.css" type="text/css" />
     <script type="text/javascript" id="documentation_options" data-url_root="./" src="static/documentation_options.js"></script>
@@ -742,7 +742,7 @@ <h3 id="searchlabel">Quick search</h3>
       <div class="clearer"></div>
     </div>
     <div class="footer">
-      &copy;2019, Nasim Sanati.
+      &copy;2020, Nasim Sanati.
 
       |
       Powered by <a href="http://sphinx-doc.org/">Sphinx 2.2.1</a>

diff --git a/docs/build/html/.buildinfo b/docs/build/html/.buildinfo
@@ -1,4 +1,4 @@
 # Sphinx build info version 1
 # This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
-config: c311ad315e1d4deef96755af88035066
+config: 2396cb4bacbbe90db61caff6f356703a
 tags: 645f666f9bcd5a90fca523b33c5a78b7
diff --git a/docs/build/html/_sources/analysis.rst.txt b/docs/build/html/_sources/analysis.rst.txt
@@ -0,0 +1,5 @@
+Analysis Service
+=================
+
+.. automodule:: reactome2py.analysis
+   :members:
diff --git a/docs/build/html/_sources/content.rst.txt b/docs/build/html/_sources/content.rst.txt
@@ -0,0 +1,5 @@
+Content Service
+=================
+
+.. automodule:: reactome2py.content
+   :members:
diff --git a/docs/build/html/_sources/index.rst.txt b/docs/build/html/_sources/index.rst.txt
@@ -0,0 +1,32 @@
+.. reactome2py documentation master file on Mon Dec  2 16:09:04 2019.
+   You can adapt this file completely to your liking, but it should at least
+   contain the root `toctree` directive.
+
+reactome2py Docs
+==================
+
+The reactome2py package is a library of helper functions that wrap calls to the reactome’s http API endpoints. It also supplies a utility module that simplifies access to reactome open-data.
+
+The reactome2py package is meant to facilitate communication between reactome tools and services with python.
+
+If you are getting started with `reactome`, visit our user’s guide page documentation site at  https://reactome.org/userguide
+
+For more information on API services or data downloads, visit:
+
+- https://reactome.org/dev
+- https://reactome.org/download-data
+
+.. toctree::
+   :maxdepth: 2
+   :caption: Contents:
+
+   analysis
+   content
+   utils
+
+Indices and tables
+^^^^^^^^^^^^^^^^^^
+
+* :ref:`genindex`
+* :ref:`modindex`
+* :ref:`search`
diff --git a/docs/build/html/_sources/utils.rst.txt b/docs/build/html/_sources/utils.rst.txt
@@ -0,0 +1,5 @@
+Utils
+=====
+
+.. automodule:: reactome2py.utils
+   :members: