R-Ladies Bioconductor collaboration post draft #62
Workflow file for this run
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| name: "Build and deploy non-production" | |
| on: | |
| pull_request: | |
| branches: | |
| - main | |
| workflow_dispatch: | |
| inputs: | |
| directory: | |
| description: 'Directory reference' | |
| required: true | |
| default: 'main' | |
| blogs: | |
| description: 'Blogs reference' | |
| required: true | |
| default: 'main' | |
| triggering_issue: | |
| description: 'Triggering PR' | |
| required: false | |
| triggering_repo: | |
| description: 'Triggering repo' | |
| required: false | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }}-${{ github.event.inputs.directory }} | |
| cancel-in-progress: true | |
| env: | |
| RENV_PROFILE: "dev" | |
| RENV_CONFIG_SANDBOX_ENABLED: FALSE | |
| issue: ${{ github.event.inputs.triggering_issue || github.event.pull_request.number }} | |
| repo_name: ${{ github.event.inputs.triggering_repo || github.repository }} | |
| directory: ${{ github.event.inputs.directory || 'main' }} | |
| blogs: ${{ github.event.inputs.blogs || 'main' }} | |
| rid: ${{ github.event.number || github.run_id }} | |
| jobs: | |
| build: | |
| name: Build site | |
| runs-on: ubuntu-latest | |
| env: | |
| hugobd: public | |
| on_fork: ${{ github.event.pull_request.head.repo.fork == true }} | |
| steps: | |
| - name: Checkout repository | |
| uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 2 | |
| - name: Set env parameters | |
| run: | | |
| ver=$(cat .hugoversion) | |
| echo "hugovr=$ver" >> $GITHUB_ENV | |
| echo "repo_owner=$(dirname ${{ env.repo_name }})" >> $GITHUB_ENV | |
| echo "repo_name=$(basename ${{ env.repo_name }})" >> $GITHUB_ENV | |
| echo "netalias=d${{ env.directory }}-b${{ env.blogs }}-r${{ env.rid}}" >> $GITHUB_ENV | |
| if [ "${{ github.event_name }}" = "workflow_dispatch" ]; then | |
| echo "token=${{ secrets.GLOBAL_GHA_PAT }}" >> $GITHUB_ENV | |
| echo "blogsref=refs/pull/${{ env.issue }}/head" >> $GITHUB_ENV | |
| else | |
| echo "token=${{ secrets.GITHUB_TOKEN }}" >> $GITHUB_ENV | |
| echo "blogsref=main" >> $GITHUB_ENV | |
| fi | |
| - name: Install cURL Headers | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install libcurl4-openssl-dev | |
| - name: Setup R | |
| uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: '4.3.0' | |
| - name: Serup renv | |
| uses: r-lib/actions/setup-renv@v2 | |
| - name: Populate untranslated pages | |
| run: | | |
| Rscript scripts/missing_translations.R | |
| - name: Site data - Clean folders | |
| if: ${{ env.on_fork != 'true' }} | |
| run: rm -r data/directory data/rblogs | |
| - name: Site data - DIRECTORY - Get | |
| uses: actions/checkout@v4 | |
| if: ${{ (env.on_fork != 'true') && env.directory == 'main' }} | |
| with: | |
| repository: rladies/directory | |
| ssh-key: ${{ secrets.ssh_directoryy_repo }} | |
| path: tmpd/dir | |
| - name: Site data - DIRECTORY - Download artifact | |
| uses: dawidd6/action-download-artifact@v2 | |
| if: ${{ (env.on_fork != 'true') && env.directory != 'main' }} | |
| with: | |
| name: entries | |
| github_token: ${{ secrets.GLOBAL_GHA_PAT }} | |
| run_id: ${{ env.directory }} | |
| repo: rladies/directory | |
| path: entries/ | |
| - name: Site data - DIRECTORY - Move | |
| if: ${{ env.on_fork != 'true' }} | |
| run: | | |
| rm -rf data/directory/* assets/directory/* | |
| if [ "${{ env.directory }}" = "main" ]; then | |
| cp -r tmpd/dir/data/json data/directory | |
| cp -r tmpd/dir/data/img/* assets/directory | |
| else | |
| mv entries/json data/directory | |
| if [ -d "entries/img" ]; then | |
| mv entries/img/* assets/directory | |
| fi | |
| fi | |
| - name: Site data - Get blogs list | |
| if: ${{ env.on_fork != 'true' }} | |
| uses: actions/checkout@v4 | |
| with: | |
| repository: rladies/awesome-rladies-blogs | |
| ssh-key: ${{ secrets.RLADIES_BLOGS_KEY}} | |
| ref: ${{ env.blogsref }} | |
| path: tmpd/rblogs | |
| - name: Site data - Meetup | |
| if: ${{ env.on_fork != 'true' }} | |
| uses: actions/checkout@v4 | |
| with: | |
| repository: rladies/meetup_archive | |
| ssh-key: ${{ secrets.MEETUP_ARCHIVE_KEY}} | |
| path: tmpd/mtp | |
| - name: Site data - clean cloned repos | |
| if: ${{ env.on_fork != 'true' }} | |
| run: | | |
| cp -r tmpd/rblogs/blogs data/rblogs | |
| cp -r tmpd/mtp/data/* data/meetup/ | |
| rm -rf tmpd | |
| - name: Setup Hugo | |
| uses: peaceiris/actions-hugo@v2 | |
| with: | |
| hugo-version: ${{ env.hugovr }} | |
| extended: true | |
| - name: Build | |
| run: | | |
| hugo \ | |
| -e development \ | |
| -d ${{ env.hugobd }} \ | |
| -b https://${{ env.netalias }}--rladies-dev.netlify.app/ | |
| - name: Deploy Preview | |
| if: ${{ env.on_fork != 'true' }} | |
| env: | |
| NETLIFY_AUTH_TOKEN: ${{ secrets.NETLIFY_AUTH_TOKEN }} | |
| NETLIFY_SITE_ID: ${{ secrets.NETLIFY_SITE_ID }} | |
| run: | | |
| npm install netlify-cli -g | |
| netlify deploy \ | |
| --alias=${{ env.netalias }} \ | |
| --dir=${{ env.hugobd }} | |
| - uses: actions/github-script@v7 | |
| name: "Notify about build failure" | |
| if: ${{ failure() }} | |
| with: | |
| github-token: ${{ env.token }} | |
| script: | | |
| await github.rest.issues.createComment({ | |
| issue_number: ${{ env.issue }}, | |
| owner: 'rladies', | |
| repo: '${{ env.repo_name }}', | |
| body: 'Test build failed :sob: [Check out the build logs](https://github.com/rladies/rladies.github.io/actions/runs/${{ github.run_id }}).' | |
| }) | |
| - uses: actions/github-script@v7 | |
| name: "Notify about build preview" | |
| with: | |
| github-token: ${{ env.token }} | |
| script: | | |
| await github.rest.issues.createComment({ | |
| issue_number: ${{ env.issue }}, | |
| owner: 'rladies', | |
| repo: '${{ env.repo_name }}', | |
| body: ':tada: The preview is built! [Check it out :eyes:](https://${{ env.netalias }}--rladies-dev.netlify.app)' | |
| }) | |