Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

p values for frequency calculations #136

Merged
merged 37 commits into from
Oct 1, 2023
Merged

p values for frequency calculations #136

merged 37 commits into from
Oct 1, 2023

Commits on Apr 2, 2023

  1. cleanup djvdj_theme

    @sheridar
    sheridar committed Apr 2, 2023
    Configuration menu
    Copy the full SHA
    6acdba4 View commit details
    Browse the repository at this point in the history

  2. improve error messages

    @sheridar
    sheridar committed Apr 2, 2023
    Configuration menu
    Copy the full SHA
    9fb81ec View commit details
    Browse the repository at this point in the history

Commits on Apr 7, 2023

  1. update docs

    @sheridar
    sheridar committed Apr 7, 2023
    Configuration menu
    Copy the full SHA
    53aa473 View commit details
    Browse the repository at this point in the history

  2. update functions for grouped plots

    @sheridar
    sheridar committed Apr 7, 2023
    Configuration menu
    Copy the full SHA
    1136028 View commit details
    Browse the repository at this point in the history

Commits on Apr 12, 2023

  1. rough implementation of pvalue labels wip

    @sheridar
    sheridar committed Apr 12, 2023
    Configuration menu
    Copy the full SHA
    6e4e0f0 View commit details
    Browse the repository at this point in the history

Commits on Apr 13, 2023

  1. save pval table

    @sheridar
    sheridar committed Apr 13, 2023
    Configuration menu
    Copy the full SHA
    2cdc01c View commit details
    Browse the repository at this point in the history

  2. p_label fixes

    @sheridar
    sheridar committed Apr 13, 2023
    Configuration menu
    Copy the full SHA
    6750bba View commit details
    Browse the repository at this point in the history

  3. update import_vdj status table

    @sheridar
    sheridar committed Apr 13, 2023
    Configuration menu
    Copy the full SHA
    19d08e3 View commit details
    Browse the repository at this point in the history

Commits on Apr 14, 2023

  1. revised p_label

    @sheridar
    sheridar committed Apr 14, 2023
    Configuration menu
    Copy the full SHA
    1d7b4d4 View commit details
    Browse the repository at this point in the history

Commits on Apr 15, 2023

  1. p_label fixes

    @sheridar
    sheridar committed Apr 15, 2023
    Configuration menu
    Copy the full SHA
    73c6a79 View commit details
    Browse the repository at this point in the history

  2. p_label fixes

    @sheridar
    sheridar committed Apr 15, 2023
    Configuration menu
    Copy the full SHA
    9a58c86 View commit details
    Browse the repository at this point in the history

  3. adjust p_label position

    @sheridar
    sheridar committed Apr 15, 2023
    Configuration menu
    Copy the full SHA
    eac6d67 View commit details
    Browse the repository at this point in the history

  4. adjust p_label position

    @sheridar
    sheridar committed Apr 15, 2023
    Configuration menu
    Copy the full SHA
    e725aee View commit details
    Browse the repository at this point in the history

  5. p_label bugs, update vignette

    @sheridar
    sheridar committed Apr 15, 2023
    Configuration menu
    Copy the full SHA
    4cb4bb1 View commit details
    Browse the repository at this point in the history

Commits on Apr 16, 2023

  1. test fixes

    @sheridar
    sheridar committed Apr 16, 2023
    Configuration menu
    Copy the full SHA
    37bccf3 View commit details
    Browse the repository at this point in the history

  2. small p_label fix

    @sheridar
    sheridar committed Apr 16, 2023
    Configuration menu
    Copy the full SHA
    93726ea View commit details
    Browse the repository at this point in the history

Commits on Apr 19, 2023

  1. fix plot_diversity bug

    @sheridar
    sheridar committed Apr 19, 2023
    Configuration menu
    Copy the full SHA
    cd0fbbf View commit details
    Browse the repository at this point in the history

Commits on Apr 20, 2023

  1. fix plot_diversity p_label

    @sheridar
    sheridar committed Apr 20, 2023
    Configuration menu
    Copy the full SHA
    fad6564 View commit details
    Browse the repository at this point in the history

Commits on Apr 21, 2023

  1. small p_label fix

    @sheridar
    sheridar committed Apr 21, 2023
    Configuration menu
    Copy the full SHA
    72fc23f View commit details
    Browse the repository at this point in the history

Commits on Jun 19, 2023

  1. small updates pvalue plotting

    @sheridar
    sheridar committed Jun 19, 2023
    Configuration menu
    Copy the full SHA
    c306b48 View commit details
    Browse the repository at this point in the history

Commits on Sep 9, 2023

  1. small fixes

    @sheridar
    sheridar committed Sep 9, 2023
    Configuration menu
    Copy the full SHA
    0a74549 View commit details
    Browse the repository at this point in the history

  2. remove unused tree code

    @sheridar
    sheridar committed Sep 9, 2023
    Configuration menu
    Copy the full SHA
    e64b2e0 View commit details
    Browse the repository at this point in the history

  3. Merge branch 'master' into pvalues

    @sheridar
    sheridar committed Sep 9, 2023
    Configuration menu
    Copy the full SHA
    5b82920 View commit details
    Browse the repository at this point in the history

Commits on Sep 10, 2023

  1. plot_diversity p-values

    @sheridar
    sheridar committed Sep 10, 2023
    Configuration menu
    Copy the full SHA
    16ee21c View commit details
    Browse the repository at this point in the history

Commits on Sep 27, 2023

  1. fix edgeR bug, small update to error messages

    @sheridar
    sheridar committed Sep 27, 2023
    Configuration menu
    Copy the full SHA
    8a20d66 View commit details
    Browse the repository at this point in the history

Commits on Sep 29, 2023

  1. remove broom dependency

    @sheridar
    sheridar committed Sep 29, 2023
    Configuration menu
    Copy the full SHA
    9b3a01e View commit details
    Browse the repository at this point in the history

  2. value section warning

    @sheridar
    sheridar committed Sep 29, 2023
    Configuration menu
    Copy the full SHA
    68645f5 View commit details
    Browse the repository at this point in the history

  3. remove example Seurat objects, fix sp warning

    @sheridar
    sheridar committed Sep 29, 2023
    Configuration menu
    Copy the full SHA
    0a16126 View commit details
    Browse the repository at this point in the history

Commits on Sep 30, 2023

  1. fix tests

    @sheridar
    sheridar committed Sep 30, 2023
    Configuration menu
    Copy the full SHA
    280ae6c View commit details
    Browse the repository at this point in the history

  2. more test fixes

    @sheridar
    sheridar committed Sep 30, 2023
    Configuration menu
    Copy the full SHA
    07c473f View commit details
    Browse the repository at this point in the history

  3. more test fixes

    @sheridar
    sheridar committed Sep 30, 2023
    Configuration menu
    Copy the full SHA
    e96e417 View commit details
    Browse the repository at this point in the history

  4. more test fixes

    @sheridar
    sheridar committed Sep 30, 2023
    Configuration menu
    Copy the full SHA
    bdb5a37 View commit details
    Browse the repository at this point in the history

  5. remove suppressMessages

    @sheridar
    sheridar committed Sep 30, 2023
    Configuration menu
    Copy the full SHA
    08b7b35 View commit details
    Browse the repository at this point in the history

Commits on Oct 1, 2023

  1. cleanup imports

    @sheridar
    sheridar committed Oct 1, 2023
    Configuration menu
    Copy the full SHA
    ce661a8 View commit details
    Browse the repository at this point in the history

  2. trim tests

    @sheridar
    sheridar committed Oct 1, 2023
    Configuration menu
    Copy the full SHA
    8ffca08 View commit details
    Browse the repository at this point in the history

  3. Update _pkgdown.yml

    @sheridar
    sheridar committed Oct 1, 2023
    Configuration menu
    Copy the full SHA
    4dc5a8d View commit details
    Browse the repository at this point in the history

  4. more test fixes

    @sheridar
    sheridar committed Oct 1, 2023
    Configuration menu
    Copy the full SHA
    7b4bbf4 View commit details
    Browse the repository at this point in the history