GitHub - rodrigoduarte88/hiv-meta-twas-2021

Name		Name	Last commit message	Last commit date
Latest commit History 3 Commits
01 - Create database for rsid - chr_bp match.txt		01 - Create database for rsid - chr_bp match.txt
02 - filter GWAS results for meta analysis by sample size.txt		02 - filter GWAS results for meta analysis by sample size.txt
03 - LDSC analyses pre-METAL - genomic correlations, heritability, intercepts.txt		03 - LDSC analyses pre-METAL - genomic correlations, heritability, intercepts.txt
04 - GWAS Meta-analysis - by sample size.txt		04 - GWAS Meta-analysis - by sample size.txt
05 - ldsc of meta-analysis (meta analysis by sample size).txt		05 - ldsc of meta-analysis (meta analysis by sample size).txt
06. partitioned heritability.txt		06. partitioned heritability.txt
07 - TWAS (meta analysis by sample size) - cross tissues + all gtex tissues.txt		07 - TWAS (meta analysis by sample size) - cross tissues + all gtex tissues.txt
08 - FOCUS - TWAS fine-mapping.txt		08 - FOCUS - TWAS fine-mapping.txt
09 - Sensitivity - Re-do meta-analysis after McLaren adjusted.txt		09 - Sensitivity - Re-do meta-analysis after McLaren adjusted.txt
10 - Manhattan plot of individual GWASs - input files for FUMA.txt		10 - Manhattan plot of individual GWASs - input files for FUMA.txt