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README.md

Saalfeld Lab Releases for Maven Users

This maven repository contains stable releases of Saalfeld Lab software not available in Maven Central.
Lab members can find information on how to package and publish releases here.

How to use

Add this to your pom.xml:

<repositories>
    <repository>
        <id>saalfeld-lab-maven-repo</id>
        <url>https://saalfeldlab.github.io/maven</url>
    </repository>
</repositories>

Then add dependencies for the specific components you wish to use.

Renderer Toolkit Releases

Version Date Source
0.3.0 5 Jan 2017 [https://github.com/saalfeldlab/render/releases/tag/v0.3.0]
1.0.0 5 Jun 2017 [https://github.com/saalfeldlab/render/releases/tag/v1.0.0]
2.0.1 27 Jul 2018 [https://github.com/saalfeldlab/render/releases/tag/v2.0.1]

Components

<dependencies>
    <dependency>
        <!-- Core render models and processing components -->
        <groupId>org.janelia.render</groupId>
        <artifactId>render-app</artifactId>
        <version>${render.version}</version>
    </dependency>
    <dependency>
        <!-- Render web service components -->
        <groupId>org.janelia.render</groupId>
        <artifactId>render-ws</artifactId>
        <version>${render.version}</version>
        <classifier>classes</classifier>
    </dependency>
    <dependency>
        <!-- Java client components that utilize render web services -->
        <groupId>org.janelia.render</groupId>
        <artifactId>render-ws-java-client</artifactId>
        <version>${render.version}</version>
    </dependency>
    <dependency>
        <!-- Spark client components that utilize render web services -->
        <groupId>org.janelia.render</groupId>
        <artifactId>render-ws-spark-client</artifactId>
        <version>${render.version}</version>
    </dependency>
    <dependency>
        <!-- Tools and scripts for translating data between the TrakEM2 and Render models -->
        <groupId>org.janelia.render</groupId>
        <artifactId>trakem2-scripts</artifactId>
        <version>${render.version}</version>
    </dependency>
</dependencies>

N5 Releases

Version Date Source
1.0.0 21 Jun 2017 [https://github.com/saalfeldlab/n5/tree/1.0.0]
1.1.0 23 Jun 2017 [https://github.com/saalfeldlab/n5/tree/1.1.0]
1.1.1 28 Jun 2017 [https://github.com/saalfeldlab/n5/tree/1.1.1]
1.1.3 28 Jun 2017 [https://github.com/saalfeldlab/n5/tree/1.1.3]
1.2.0 25 Aug 2017 [https://github.com/saalfeldlab/n5/tree/1.2.0]
1.3.0 18 Dec 2017 [https://github.com/saalfeldlab/n5/tree/1.3.0]
1.4.0 20 Dec 2017 [https://github.com/saalfeldlab/n5/tree/1.4.0]
1.5.0 16 Jan 2018 [https://github.com/saalfeldlab/n5/tree/1.5.0]
2.0.0 17 Jan 2018 [https://github.com/saalfeldlab/n5/tree/2.0.0]
2.0.1 02 Feb 2018 [https://github.com/saalfeldlab/n5/tree/2.0.1]
2.0.2 12 Mar 2018 [https://github.com/saalfeldlab/n5/tree/2.0.2]

Components

<dependencies>
    <dependency>
        <groupId>org.janelia.saalfeldlab</groupId>
        <artifactId>n5</artifactId>
        <version>${n5.version}</version>
    </dependency>
</dependencies>

N5 HDF5 Releases

Version Date Source
1.0.0 17 Jan 2018 [https://github.com/saalfeldlab/n5-hdf5/tree/1.0.0]
1.0.1 02 Feb 2018 [https://github.com/saalfeldlab/n5-hdf5/tree/1.0.1]
1.0.2 12 Mar 2018 [https://github.com/saalfeldlab/n5-hdf5/tree/1.0.2]

Components

<dependencies>
    <dependency>
        <groupId>org.janelia.saalfeldlab</groupId>
        <artifactId>n5-hdf5</artifactId>
        <version>${n5-hdf5.version}</version>
    </dependency>
</dependencies>

N5 ImgLib2 Releases

Version Date Source
1.0.0 21 Jun 2017 [https://github.com/saalfeldlab/n5-imglib2/tree/1.0.0]
1.1.0 18 Dec 2017 [https://github.com/saalfeldlab/n5-imglib2/tree/1.1.0]
2.0.0 17 Jan 2018 [https://github.com/saalfeldlab/n5-imglib2/tree/2.0.0]
2.1.0 13 Mar 2018 [https://github.com/saalfeldlab/n5-imglib2/tree/2.1.0]
2.1.1 14 Mar 2018 [https://github.com/saalfeldlab/n5-imglib2/tree/2.1.1]
3.0.0 11 May 2018 [https://github.com/saalfeldlab/n5-imglib2/tree/3.0.0]

Components

<dependencies>
    <dependency>
        <groupId>org.janelia.saalfeldlab</groupId>
        <artifactId>n5-imglib2</artifactId>
        <version>${n5-imglib2.version}</version>
    </dependency>
</dependencies>

N5 Spark Releases

Version Date Source
1.0.0 17 Sep 2017 [https://github.com/saalfeldlab/n5-spark/tree/1.0.0]
1.1.0 19 Dec 2017 [https://github.com/saalfeldlab/n5-spark/tree/1.1.0]
2.0.0 17 Jan 2018 [https://github.com/saalfeldlab/n5-spark/tree/2.0.0]
2.1.0 13 Mar 2018 [https://github.com/saalfeldlab/n5-spark/tree/2.1.0]
3.0.0 22 Jun 2018 [https://github.com/saalfeldlab/n5-spark/tree/3.0.0]

Components

<dependencies>
    <dependency>
        <groupId>org.janelia.saalfeldlab</groupId>
        <artifactId>n5-spark</artifactId>
        <version>${n5-spark.version}</version>
    </dependency>
</dependencies>

N5 AWS S3 Releases

Version Date Source
1.0.0 19 Dec 2017 [https://github.com/saalfeldlab/n5-aws-s3/tree/1.0.0]
2.0.0 17 Jan 2018 [https://github.com/saalfeldlab/n5-aws-s3/tree/2.0.0]
2.0.1 02 Feb 2018 [https://github.com/saalfeldlab/n5-aws-s3/tree/2.0.1]
2.0.2 14 Mar 2018 [https://github.com/saalfeldlab/n5-aws-s3/tree/2.0.2]
2.1.0 23 Apr 2018 [https://github.com/saalfeldlab/n5-aws-s3/tree/2.1.0]

Components

<dependencies>
    <dependency>
        <groupId>org.janelia.saalfeldlab</groupId>
        <artifactId>n5-aws-s3</artifactId>
        <version>${n5-aws-s3.version}</version>
    </dependency>
</dependencies>

N5 Google Cloud Releases

Version Date Source
1.0.0 19 Dec 2017 [https://github.com/saalfeldlab/n5-google-cloud/tree/1.0.0]
2.0.0 17 Jan 2018 [https://github.com/saalfeldlab/n5-google-cloud/tree/2.0.0]
2.0.1 02 Feb 2018 [https://github.com/saalfeldlab/n5-google-cloud/tree/2.0.1]
2.0.2 14 Mar 2018 [https://github.com/saalfeldlab/n5-google-cloud/tree/2.0.2]
2.1.0 19 Apr 2018 [https://github.com/saalfeldlab/n5-google-cloud/tree/2.1.0]
2.1.1 20 Apr 2018 [https://github.com/saalfeldlab/n5-google-cloud/tree/2.1.1]
2.2.0 20 Apr 2018 [https://github.com/saalfeldlab/n5-google-cloud/tree/2.2.0]
2.3.0 23 Apr 2018 [https://github.com/saalfeldlab/n5-google-cloud/tree/2.3.0]
2.3.1 23 Apr 2018 [https://github.com/saalfeldlab/n5-google-cloud/tree/2.3.1]

Components

<dependencies>
    <dependency>
        <groupId>org.janelia.saalfeldlab</groupId>
        <artifactId>n5-google-cloud</artifactId>
        <version>${n5-google-cloud.version}</version>
    </dependency>
</dependencies>

N5 Viewer Releases

Version Date Source
1.0.0 30 Jun 2017 [https://github.com/saalfeldlab/n5-viewer/tree/1.0.0]
1.2.0 19 Dec 2017 [https://github.com/saalfeldlab/n5-viewer/tree/1.2.0]
2.0.0 17 Jan 2018 [https://github.com/saalfeldlab/n5-viewer/tree/2.0.0]
2.1.0 02 Aug 2018 [https://github.com/saalfeldlab/n5-viewer/tree/2.1.0]

Components

<dependencies>
    <dependency>
        <groupId>org.janelia.saalfeldlab</groupId>
        <artifactId>n5-viewer_fiji</artifactId>
        <version>${n5-viewer_fiji.version}</version>
    </dependency>
</dependencies>

N5 Label Multisets Releases

Version Date Source
0.1.0 19 Apr 2018 [https://github.com/saalfeldlab/n5-label-multisets/tree/0.1.0]
0.2.0 30 Apr 2018 [https://github.com/saalfeldlab/n5-label-multisets/tree/0.2.0]
0.3.0 28 Jun 2018 [https://github.com/saalfeldlab/n5-label-multisets/tree/0.3.0]
0.4.0 18 Aug 2018 [https://github.com/saalfeldlab/n5-label-multisets/tree/0.4.0]
0.4.1 12 Sep 2018 [https://github.com/saalfeldlab/n5-label-multisets/tree/0.4.1]

Components

<dependencies>
    <dependency>
        <groupId>org.janelia.saalfeldlab</groupId>
        <artifactId>n5-label-multisets</artifactId>
        <version>${n5-label-multisets.version}</version>
    </dependency>
</dependencies>

BigCAT Releases

Version Date Source
0.0.1-beta-1 1 Sep 2017 [https://github.com/saalfeldlab/bigcat/tree/0.0.1-beta-1]
0.0.3-beta-1 6 Feb 2018 [https://github.com/saalfeldlab/bigcat/tree/0.0.3-beta-1]

Components

<dependencies>
    <dependency>
        <groupId>sc.fiji</groupId>
        <artifactId>bigcat</artifactId>
        <version>${bigcat.version}</version>
    </dependency>
</dependencies>

Label Utilities Releases

Version Date Source
0.1.0 06 Sep 2018 [https://github.com/saalfeldlab/label-utilities/tree/0.1.0]

Components

<dependencies>
    <dependency>
        <groupId>org.janelia.saalfeldlab</groupId>
        <artifactId>label-utilities</artifactId>
        <version>${label-utilities.version}</version>
    </dependency>
</dependencies>

Label Utilities Spark Releases

Version Date Source
0.1.0 29 Jun 2018 [https://github.com/saalfeldlab/label-utilities-spark/tree/0.1.0]
0.1.1 03 Jul 2018 [https://github.com/saalfeldlab/label-utilities-spark/tree/0.1.1]
0.2.0 20 Jul 2018 [https://github.com/saalfeldlab/label-utilities-spark/tree/0.2.0]

Components

<dependencies>
    <dependency>
        <groupId>org.janelia.saalfeldlab</groupId>
        <artifactId>label-utilities-spark</artifactId>
        <version>${label-utilities-spark.version}</version>
    </dependency>
</dependencies>

Paintera Releases

Version Date Source
0.1.0 09 Jul 2018 [https://github.com/saalfeldlab/paintera/tree/0.1.0]
0.1.1 12 Jul 2018 [https://github.com/saalfeldlab/paintera/tree/0.1.1]
0.1.2 13 Jul 2018 [https://github.com/saalfeldlab/paintera/tree/0.1.2]
0.2.0 16 Jul 2018 [https://github.com/saalfeldlab/paintera/tree/0.2.0]
0.2.1 18 Jul 2018 [https://github.com/saalfeldlab/paintera/tree/0.2.1]
0.2.2 25 Jul 2018 [https://github.com/saalfeldlab/paintera/tree/0.2.2]
0.2.3 31 Jul 2018 [https://github.com/saalfeldlab/paintera/tree/0.2.3]
0.2.4 14 Aug 2018 [https://github.com/saalfeldlab/paintera/tree/0.2.4]
0.2.5 16 Aug 2018 [https://github.com/saalfeldlab/paintera/tree/0.2.5]
0.3.0 21 Aug 2018 [https://github.com/saalfeldlab/paintera/tree/0.3.0]
0.4.0 28 Aug 2018 [https://github.com/saalfeldlab/paintera/tree/0.4.0]

Components

<dependencies>
    <dependency>
        <groupId>org.janelia.saalfeldlab</groupId>
        <artifactId>paintera</artifactId>
        <version>${paintera.version}</version>
    </dependency>
</dependencies>

Paintera Conversion Helper Releases

Version Date Source
0.1.0 03 Jul 2018 [https://github.com/saalfeldlab/paintera-conversion-helper/tree/0.1.0]
0.1.1 19 Jul 2018 [https://github.com/saalfeldlab/paintera-conversion-helper/tree/0.1.1]
0.2.0 20 Jul 2018 [https://github.com/saalfeldlab/paintera-conversion-helper/tree/0.2.0]
0.3.0 13 Aug 2018 [https://github.com/saalfeldlab/paintera-conversion-helper/tree/0.3.0]

Components

<dependencies>
    <dependency>
        <groupId>org.janelia.saalfeldlab</groupId>
        <artifactId>paintera-conversion-helper</artifactId>
        <version>${paintera-conversion-helper.version}</version>
    </dependency>
</dependencies>

ImgLib2 ImgLyb

Version Date Source
0.1.0 10 Jul 2018 [https://github.com/hanslovsky/imglib2-imglyb/tree/0.1.0]
0.2.0 16 Jul 2018 [https://github.com/hanslovsky/imglib2-imglyb/tree/0.2.0]
0.2.1 16 Jul 2018 [https://github.com/hanslovsky/imglib2-imglyb/tree/0.2.1]
0.2.2 18 Jul 2018 [https://github.com/hanslovsky/imglib2-imglyb/tree/0.2.2]
0.3.0 30 Aug 2018 [https://github.com/hanslovsky/imglib2-imglyb/tree/0.3.0]

Components

<dependencies>
    <dependency>
        <groupId>net.imglib</groupId>
        <artifactId>imglib2-imglyb</artifactId>
        <version>${imglib2-imglyb.version}</version>
    </dependency>
</dependencies>