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py file headers: removed author list (was too long and incomplete)
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@deeenes
deeenes committed Jun 21, 2023
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15 changes: 5 additions & 10 deletions pypath/__init__.py
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#
# This file is part of the `pypath` python module
#
# Copyright
# 2014-2022
# Copyright 2014-2023
# EMBL, EMBL-EBI, Uniklinik RWTH Aachen, Heidelberg University
#
# Authors: Dénes Türei (turei.denes@gmail.com)
# Nicolàs Palacio
# Sebastian Lobentanzer
# Erva Ulusoy
# Olga Ivanova
# Ahmet Rifaioglu
# Authors: see the file `README.rst`
# Contact: Dénes Türei (turei.denes@gmail.com)
#
# Distributed under the GPLv3 License.
# See accompanying file LICENSE.txt or copy at
# http://www.gnu.org/licenses/gpl-3.0.html
# https://www.gnu.org/licenses/gpl-3.0.html
#
# Website: http://pypath.omnipathdb.org/
# Website: https://pypath.omnipathdb.org/
#

"""
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15 changes: 5 additions & 10 deletions pypath/_metadata.py
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#
# This file is part of the `pypath` python module
#
# Copyright
# 2014-2022
# Copyright 2014-2023
# EMBL, EMBL-EBI, Uniklinik RWTH Aachen, Heidelberg University
#
# Authors: Dénes Türei (turei.denes@gmail.com)
# Nicolàs Palacio
# Sebastian Lobentanzer
# Erva Ulusoy
# Olga Ivanova
# Ahmet Rifaioglu
# Authors: see the file `README.rst`
# Contact: Dénes Türei (turei.denes@gmail.com)
#
# Distributed under the GPLv3 License.
# See accompanying file LICENSE.txt or copy at
# http://www.gnu.org/licenses/gpl-3.0.html
# https://www.gnu.org/licenses/gpl-3.0.html
#
# Website: http://pypath.omnipathdb.org/
# Website: https://pypath.omnipathdb.org/
#

"""
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17 changes: 5 additions & 12 deletions pypath/biocypher/__init__.py
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#
# This file is part of the `pypath` python module
#
# Copyright
# 2014-2022
# Copyright 2014-2023
# EMBL, EMBL-EBI, Uniklinik RWTH Aachen, Heidelberg University
#
# Authors: Dénes Türei (turei.denes@gmail.com)
# Nicolàs Palacio
# Sebastian Lobentanzer
# Erva Ulusoy
# Olga Ivanova
# Ahmet Rifaioglu
# Tennur Kılıç
# Authors: see the file `README.rst`
# Contact: Dénes Türei (turei.denes@gmail.com)
#
# Distributed under the GPLv3 License.
# See accompanying file LICENSE.txt or copy at
# http://www.gnu.org/licenses/gpl-3.0.html
# https://www.gnu.org/licenses/gpl-3.0.html
#
# Website: http://pypath.omnipathdb.org/
# Website: https://pypath.omnipathdb.org/
#


from pypath.biocypher.adapter import Adapter

__all__ = ['Adapter']
16 changes: 5 additions & 11 deletions pypath/biocypher/adapter.py
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#
# This file is part of the `pypath` python module
#
# Copyright
# 2014-2022
# Copyright 2014-2023
# EMBL, EMBL-EBI, Uniklinik RWTH Aachen, Heidelberg University
#
# Authors: Dénes Türei (turei.denes@gmail.com)
# Nicolàs Palacio
# Sebastian Lobentanzer
# Erva Ulusoy
# Olga Ivanova
# Ahmet Rifaioglu
# Tennur Kılıç
# Authors: see the file `README.rst`
# Contact: Dénes Türei (turei.denes@gmail.com)
#
# Distributed under the GPLv3 License.
# See accompanying file LICENSE.txt or copy at
# http://www.gnu.org/licenses/gpl-3.0.html
# https://www.gnu.org/licenses/gpl-3.0.html
#
# Website: http://pypath.omnipathdb.org/
# Website: https://pypath.omnipathdb.org/
#

"""
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19 changes: 19 additions & 0 deletions pypath/core/__init__.py
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#!/usr/bin/env python
# -*- coding: utf-8 -*-

#
# This file is part of the `pypath` python module
#
# Copyright 2014-2023
# EMBL, EMBL-EBI, Uniklinik RWTH Aachen, Heidelberg University
#
# Authors: see the file `README.rst`
# Contact: Dénes Türei (turei.denes@gmail.com)
#
# Distributed under the GPLv3 License.
# See accompanying file LICENSE.txt or copy at
# https://www.gnu.org/licenses/gpl-3.0.html
#
# Website: https://pypath.omnipathdb.org/
#

17 changes: 5 additions & 12 deletions pypath/core/annot.py
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#
# This file is part of the `pypath` python module
# Provides classes for each database for annotations of proteins and complexes.
# Also provides meta-annotations for the databases.
#
# Copyright
# 2014-2022
# Copyright 2014-2023
# EMBL, EMBL-EBI, Uniklinik RWTH Aachen, Heidelberg University
#
# Authors: Dénes Türei (turei.denes@gmail.com)
# Nicolàs Palacio
# Sebastian Lobentanzer
# Erva Ulusoy
# Olga Ivanova
# Ahmet Rifaioglu
# Authors: see the file `README.rst`
# Contact: Dénes Türei (turei.denes@gmail.com)
#
# Distributed under the GPLv3 License.
# See accompanying file LICENSE.txt or copy at
# http://www.gnu.org/licenses/gpl-3.0.html
# https://www.gnu.org/licenses/gpl-3.0.html
#
# Website: http://pypath.omnipathdb.org/
# Website: https://pypath.omnipathdb.org/
#

from __future__ import annotations
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17 changes: 5 additions & 12 deletions pypath/core/attrs.py
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#
# This file is part of the `pypath` python module
# Provides classes for each database for annotations of proteins and complexes.
# Also provides meta-annotations for the databases.
#
# Copyright
# 2014-2022
# Copyright 2014-2023
# EMBL, EMBL-EBI, Uniklinik RWTH Aachen, Heidelberg University
#
# Authors: Dénes Türei (turei.denes@gmail.com)
# Nicolàs Palacio
# Sebastian Lobentanzer
# Erva Ulusoy
# Olga Ivanova
# Ahmet Rifaioglu
# Authors: see the file `README.rst`
# Contact: Dénes Türei (turei.denes@gmail.com)
#
# Distributed under the GPLv3 License.
# See accompanying file LICENSE.txt or copy at
# http://www.gnu.org/licenses/gpl-3.0.html
# https://www.gnu.org/licenses/gpl-3.0.html
#
# Website: http://pypath.omnipathdb.org/
# Website: https://pypath.omnipathdb.org/
#

from future.utils import iteritems
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17 changes: 5 additions & 12 deletions pypath/core/common.py
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#
# This file is part of the `pypath` python module
# Provides classes for each database for annotations of proteins and complexes.
# Also provides meta-annotations for the databases.
#
# Copyright
# 2014-2022
# Copyright 2014-2023
# EMBL, EMBL-EBI, Uniklinik RWTH Aachen, Heidelberg University
#
# Authors: Dénes Türei (turei.denes@gmail.com)
# Nicolàs Palacio
# Sebastian Lobentanzer
# Erva Ulusoy
# Olga Ivanova
# Ahmet Rifaioglu
# Authors: see the file `README.rst`
# Contact: Dénes Türei (turei.denes@gmail.com)
#
# Distributed under the GPLv3 License.
# See accompanying file LICENSE.txt or copy at
# http://www.gnu.org/licenses/gpl-3.0.html
# https://www.gnu.org/licenses/gpl-3.0.html
#
# Website: http://pypath.omnipathdb.org/
# Website: https://pypath.omnipathdb.org/
#

"""
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17 changes: 5 additions & 12 deletions pypath/core/complex.py
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#
# This file is part of the `pypath` python module
# Creates a complex meta-database accessible through either pypath
# or Omnipath.
#
# Copyright
# 2014-2022
# Copyright 2014-2023
# EMBL, EMBL-EBI, Uniklinik RWTH Aachen, Heidelberg University
#
# Authors: Dénes Türei (turei.denes@gmail.com)
# Nicolàs Palacio
# Sebastian Lobentanzer
# Erva Ulusoy
# Olga Ivanova
# Ahmet Rifaioglu
# Authors: see the file `README.rst`
# Contact: Dénes Türei (turei.denes@gmail.com)
#
# Distributed under the GPLv3 License.
# See accompanying file LICENSE.txt or copy at
# http://www.gnu.org/licenses/gpl-3.0.html
# https://www.gnu.org/licenses/gpl-3.0.html
#
# Website: http://pypath.omnipathdb.org/
# Website: https://pypath.omnipathdb.org/
#

from future.utils import iteritems
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16 changes: 6 additions & 10 deletions pypath/core/entity.py
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#
# This file is part of the `pypath` python module
# Exports tables for webservice.
#
# Copyright (c) 2014-2022 - EMBL
# Copyright 2014-2023
# EMBL, EMBL-EBI, Uniklinik RWTH Aachen, Heidelberg University
#
# Authors: Dénes Türei (turei.denes@gmail.com)
# Nicolàs Palacio
# Sebastian Lobentanzer
# Erva Ulusoy
# Olga Ivanova
# Ahmet Rifaioglu
# Authors: see the file `README.rst`
# Contact: Dénes Türei (turei.denes@gmail.com)
#
# Distributed under the GPLv3 License.
# See accompanying file LICENSE.txt or copy at
# http://www.gnu.org/licenses/gpl-3.0.html
# https://www.gnu.org/licenses/gpl-3.0.html
#
# Website: http://pypath.omnipathdb.org/
# Website: https://pypath.omnipathdb.org/
#

"""
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15 changes: 5 additions & 10 deletions pypath/core/enz_sub.py
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#
# This file is part of the `pypath` python module
#
# Copyright
# 2014-2022
# Copyright 2014-2023
# EMBL, EMBL-EBI, Uniklinik RWTH Aachen, Heidelberg University
#
# Authors: Dénes Türei (turei.denes@gmail.com)
# Nicolàs Palacio
# Sebastian Lobentanzer
# Erva Ulusoy
# Olga Ivanova
# Ahmet Rifaioglu
# Authors: see the file `README.rst`
# Contact: Dénes Türei (turei.denes@gmail.com)
#
# Distributed under the GPLv3 License.
# See accompanying file LICENSE.txt or copy at
# http://www.gnu.org/licenses/gpl-3.0.html
# https://www.gnu.org/licenses/gpl-3.0.html
#
# Website: http://pypath.omnipathdb.org/
# Website: https://pypath.omnipathdb.org/
#

from future.utils import iteritems
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16 changes: 5 additions & 11 deletions pypath/core/evidence.py
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#
# This file is part of the `pypath` python module
# (Planned for) centrally handling cache for all databases/resources.
#
# Copyright
# 2014-2022
# Copyright 2014-2023
# EMBL, EMBL-EBI, Uniklinik RWTH Aachen, Heidelberg University
#
# Authors: Dénes Türei (turei.denes@gmail.com)
# Nicolàs Palacio
# Sebastian Lobentanzer
# Erva Ulusoy
# Olga Ivanova
# Ahmet Rifaioglu
# Authors: see the file `README.rst`
# Contact: Dénes Türei (turei.denes@gmail.com)
#
# Distributed under the GPLv3 License.
# See accompanying file LICENSE.txt or copy at
# http://www.gnu.org/licenses/gpl-3.0.html
# https://www.gnu.org/licenses/gpl-3.0.html
#
# Website: http://pypath.omnipathdb.org/
# Website: https://pypath.omnipathdb.org/
#

"""
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15 changes: 5 additions & 10 deletions pypath/core/interaction.py
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#
# This file is part of the `pypath` python module
#
# Copyright
# 2014-2022
# Copyright 2014-2023
# EMBL, EMBL-EBI, Uniklinik RWTH Aachen, Heidelberg University
#
# Authors: Dénes Türei (turei.denes@gmail.com)
# Nicolàs Palacio
# Sebastian Lobentanzer
# Erva Ulusoy
# Olga Ivanova
# Ahmet Rifaioglu
# Authors: see the file `README.rst`
# Contact: Dénes Türei (turei.denes@gmail.com)
#
# Distributed under the GPLv3 License.
# See accompanying file LICENSE.txt or copy at
# http://www.gnu.org/licenses/gpl-3.0.html
# https://www.gnu.org/licenses/gpl-3.0.html
#
# Website: http://pypath.omnipathdb.org/
# Website: https://pypath.omnipathdb.org/
#

"""
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