GitHub - samanthamolnar/WormCode

This repository has been archived by the owner on Mar 6, 2019. It is now read-only.

Name		Name	Last commit message	Last commit date
Latest commit History 2 Commits
find_landmarks.dSYM/Contents		find_landmarks.dSYM/Contents
test_cases		test_cases
.DS_Store.txt		.DS_Store.txt
Annulus1_np20r1L5dp1_worm1_persistence_diagram.png		Annulus1_np20r1L5dp1_worm1_persistence_diagram.png
BuildComplexNEW2MESSWITH.py		BuildComplexNEW2MESSWITH.py
BuildComplexNEW2MESSWITH.pyc		BuildComplexNEW2MESSWITH.pyc
BuildComplex_WFL.py		BuildComplex_WFL.py
BuildComplex_WFL.pyc		BuildComplex_WFL.pyc
BuildRankFunction.py		BuildRankFunction.py
BuildRankFunction.pyc		BuildRankFunction.pyc
DelayCoordinateEmbedding.py		DelayCoordinateEmbedding.py
DelayCoordinateEmbedding.pyc		DelayCoordinateEmbedding.pyc
GetHomologyFromFiltrationNEW.py		GetHomologyFromFiltrationNEW.py
GetHomologyFromFiltrationNEW.pyc		GetHomologyFromFiltrationNEW.pyc
L63_x_m2_tau20_Perseus_homology_0.txt		L63_x_m2_tau20_Perseus_homology_0.txt
L63_x_m2_tau20_Perseus_homology_betti.txt		L63_x_m2_tau20_Perseus_homology_betti.txt
L63_x_m2_tau20_complex_for_Perseus.txt		L63_x_m2_tau20_complex_for_Perseus.txt
PlotterNEW.py		PlotterNEW.py
PlotterNEW.pyc		PlotterNEW.pyc
README.txt		README.txt
RunPerseusFromPoints.py		RunPerseusFromPoints.py
RunPerseusFromPoints.pyc		RunPerseusFromPoints.pyc
TRYplotter19.py		TRYplotter19.py
TRYplotter19.pyc		TRYplotter19.pyc
TestFileGenerator.py		TestFileGenerator.py
TestFileGenerator.pyc		TestFileGenerator.pyc
TesterNEW.py		TesterNEW.py
TestingFunctionsNEW.py		TestingFunctionsNEW.py
TestingFunctionsNEW.pyc		TestingFunctionsNEW.pyc
WormSliding.py		WormSliding.py
WormSliding.pyc		WormSliding.pyc
find_landmarks		find_landmarks
find_landmarks.c		find_landmarks.c
gnuplot_commands.txt		gnuplot_commands.txt
landmark_outputs.txt		landmark_outputs.txt
nandnank_outputs.txt		nandnank_outputs.txt
perseusMac		perseusMac

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To compile the program create the following alias in the terminal: 
alias make='/usr/local/bin/gcc-5 -fopenmp -lpopt -o find_landmarks find_landmarks.c'
Then type 'make'