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htslib branch tabix does not work for remote files #6

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mcshane opened this issue Feb 6, 2014 · 0 comments

mcshane commented Feb 6, 2014

The htslib branch does not handle ftp:// or http:// file locations.

E.g.

./tabix -h ftp://ftp.1000genomes.ebi.ac.uk//vol1/ftp/phase1/analysis_results/integrated_call_sets/ALL.wgs.integrated_phase1_v3.20101123.snps_indels_sv.sites.vcf.gz 20
Could not load .tbi index of ftp://ftp.1000genomes.ebi.ac.uk//vol1/ftp/phase1/analysis_results/integrated_call_sets/ALL.wgs.integrated_phase1_v3.20101123.snps_indels_sv.sites.vcf.gz

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