C library for high-throughput sequencing data formats
Tools (written in C using htslib) for manipulating next-generation sequencing data
Note: tabix and bgzip binaries are now part of the HTSlib project.
A Java API for high-throughput sequencing data (HTS) formats.
This is the official development repository for BCFtools. To compile, the develop branch of htslib is needed: git clone --branch=develop git://github.com/samtools/htslib.git htslib
Specifications of SAM/BAM and related high-throughput sequencing file formats
Maintenance scripts used with the htslib/samtools/bcftools repositories
The http://www.htslib.org/ web site
Plugins for use with HTSlib
Sequence Alignment Programming Interface