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Kraken version parsing error: #376

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tseemann opened this issue Jan 12, 2018 · 1 comment
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Kraken version parsing error: #376

tseemann opened this issue Jan 12, 2018 · 1 comment

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@tseemann
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tseemann commented Jan 12, 2018 •
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Regexp needs fixing:

https://github.com/sanger-pathogens/Roary/blob/master/lib/Bio/Roary/External/CheckTools.pm#L63

OLD:

kraken/0.10.5-beta/bin/kraken  --version
Kraken version 0.10.5-beta
Copyright 2013-2015, Derrick Wood (dwood@cs.jhu.edu)

NEW:

kraken -v
Kraken version 1.0
Copyright 2013-2015, Derrick Wood (dwood@cs.jhu.edu)
@tseemann tseemann mentioned this issue Jan 12, 2018
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@andrewjpage
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fixed thanks

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@andrewjpage @tseemann