Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Kmc threads #55

Merged
merged 2 commits into from
Jan 25, 2016
Merged

Kmc threads #55

merged 2 commits into from
Jan 25, 2016

Conversation

martinghunt
Copy link
Contributor

This PR changes to run kmc with >1 thread. By default, kmc now uses the same number of threads as everything else. Previously it always used one thread.

In case this causes issues, also add a user option --kmc_onethread, to force kmc to use one thread.

jgtate pushed a commit that referenced this pull request Jan 25, 2016
@jgtate jgtate merged commit b3f7b1d into sanger-pathogens:master Jan 25, 2016
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

None yet

2 participants