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Print to screen #63

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robynslee opened this issue Sep 25, 2017 · 2 comments
Closed

Print to screen #63

robynslee opened this issue Sep 25, 2017 · 2 comments

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@robynslee
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Hi there,
Just a suggestion - an output file seems to be required to run commands, but it might be nice if we could just print to screen if we just want to have a quick look at the data.
Thanks!

@tseemann
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This is a good idea. If -o not specifed, use stdout.

@rsleeepi you might be able to emulate this now using snp-sites -o /dev/stdout

@andrewjpage
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The default is now to print to STDOUT
https://github.com/sanger-pathogens/snp-sites/releases/tag/v2.4.0

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