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Bifurcations using ZigZag (BuZZ)

** NOTE! BuZZ has been moved to a new home. It is now kept in teaspoon. Documentation can be found here **

Description

This package provides python code to compute zigzag persistence from point cloud data by leveraging code from Dionysus 2.

See Examples folder for examples of usage.

Installation

Will be improved eventually, but for now add to your .bashrc:

export PYTHONPATH="${PYTHONPATH}:/path/to/BuZZ"

Requirements

Must have Dionysus 2 installed. Can install with

pip install dionysus

Paper

Preprint coming soon!

Sarah Tymochko, Elizabeth Munch, Firas Khasawneh. Using Zigzag Persistent Homology to Detect Hopf Bifurcations in Dynamical Systems. Preprint, 2020.

Contact

Sarah Tymochko: tymochko@egr.msu.edu.

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