Error with spatstat version 2.0

[mihem]

Hi,

after upgrading spatstat to the most recent version 2.0-1. https://cran.r-project.org/web/packages/spatstat/index.html, I get

Error: package or namespace load failed for ‘Seurat’: object ‘markvario’ is not exported by 'namespace:spatstat'

Downgrading spatstat to an earlier version, works as a workaround

devtools::install_version("spatstat", version = "1.64-1", repos = "http://cran.us.r-project.org")

Best,
Mischko

[baj12]

disabling upgrade after installing 1.64-1 helped for me.

devtools::install_github(repo = 'satijalab/seurat', ref = 'develop', upgrade='never')

[andrewwbutler]

Hi,

Thanks for reporting. Going to close this issue just to consolidate responses in #4226.

We are aware of this issue and working on submitting a fix to CRAN. In the meantime, this issue has been resolved on the develop branch of Seurat. To install the development version of Seurat, please see the instructions here.