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update ReadParseBio to be compatible with latest split-pipe v1.1.0 #7565

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merged 2 commits into from Jul 13, 2023

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epapalexi
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Hi Seurat Team!

In the latest version of split-pipe (v1.1.0) from Parse Biosciences the DGE.mtx file name changed to count_matrix.mtx. This change breaks the ReadParseBio() so I modified the function to be compatible with both file name types.

I hope you can incorporate the change to the next Seurat update!

Best,
Efi

@saketkc saketkc changed the base branch from master to develop July 12, 2023 22:55
@saketkc saketkc merged commit 4547dcc into develop Jul 13, 2023
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@saketkc saketkc deleted the ParseUpdate branch July 13, 2023 00:30
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2 participants