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Add route to load full mesh stl of a segment/agglomerate #7587

Merged
merged 58 commits into from
Mar 11, 2024
Merged

Add route to load full mesh stl of a segment/agglomerate #7587

merged 58 commits into from
Mar 11, 2024

Commits on Jan 24, 2024

  1. WIP: Add route to load full mesh of a segment/agglomerate

    @fm3
    fm3 committed Jan 24, 2024
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  2. stubs

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    fm3 committed Jan 24, 2024
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Commits on Jan 29, 2024

  1. Merge branch 'master' into load-full-mesh

    @fm3
    fm3 committed Jan 29, 2024
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  2. JNI experiment

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    fm3 committed Jan 29, 2024
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  3. cpp stub

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    fm3 committed Jan 29, 2024
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Commits on Feb 1, 2024

  1. Merge branch 'master' into load-full-mesh

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    fm3 committed Feb 1, 2024
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  2. jarray experiments

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    fm3 committed Feb 1, 2024
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  3. transfer byte arrays

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    fm3 committed Feb 1, 2024
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  4. decoder stub

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    fm3 committed Feb 1, 2024
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  5. include draco

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    fm3 committed Feb 1, 2024
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  6. remove unused draco source + docs + test files

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    fm3 committed Feb 1, 2024
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Commits on Feb 8, 2024

  1. Merge branch 'master' into load-full-mesh

    @fm3
    fm3 committed Feb 8, 2024
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  2. use installed draco instead

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    fm3 committed Feb 8, 2024
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  3. install libdraco

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    fm3 committed Feb 8, 2024
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  4. split classes

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    fm3 committed Feb 8, 2024
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  5. implement dracoToStlDecoder in cpp

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    fm3 committed Feb 8, 2024
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Commits on Feb 12, 2024

  1. concat stl output into single file

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    fm3 committed Feb 12, 2024
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  2. include offsets from meshfile, cleanup

    @fm3
    fm3 committed Feb 12, 2024
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  3. remove unused stuff

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    fm3 committed Feb 12, 2024
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  4. WIP: support adhoc meshing

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    fm3 committed Feb 12, 2024
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  5. WIP: convert ad-hoc mesh output to stl format

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    fm3 committed Feb 12, 2024
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  6. WIP: include normals in adHocMesh stl

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    fm3 committed Feb 12, 2024
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  7. cross product, normalize

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    fm3 committed Feb 12, 2024
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Commits on Feb 15, 2024

  1. Merge branch 'master' into load-full-mesh

    @fm3
    fm3 committed Feb 15, 2024
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  2. fix encoding ad-hoc mesh as stl

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    fm3 committed Feb 15, 2024
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  3. extract adding stl header

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    fm3 committed Feb 15, 2024
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  4. continue with neighbors

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    fm3 committed Feb 15, 2024
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  5. format

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Commits on Feb 20, 2024

  1. Merge branch 'master' into load-full-mesh

    @fm3
    fm3 committed Feb 20, 2024
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  2. remove subsampling strides, add 1vx overlap for marchungCubes chunks

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    fm3 committed Feb 20, 2024
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  3. connect prototype to api

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    fm3 committed Feb 20, 2024
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  4. throw java exceptions in jni code

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    fm3 committed Feb 20, 2024
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  5. pretty

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    fm3 committed Feb 20, 2024
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Commits on Feb 21, 2024

  1. mapping support for meshfile-based variant. slightly cleanup cpp code

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    fm3 committed Feb 21, 2024
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  2. test with adhoc+mapping

    @fm3
    fm3 committed Feb 21, 2024
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  3. WIP: tracingstore route

    @fm3
    fm3 committed Feb 21, 2024
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  4. implement tracingstore route with meshfile

    @fm3
    fm3 committed Feb 21, 2024
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  5. fix forwarding

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    fm3 committed Feb 21, 2024
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  6. implement ad-hoc meshing stl for tracingstore

    @fm3
    fm3 committed Feb 21, 2024
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  7. more verbose error message

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    fm3 committed Feb 21, 2024
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  8. transform vertices with scale/voxelsize from meshfile transform

    @fm3
    fm3 committed Feb 21, 2024
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  9. dev install

    @normanrz
    normanrz committed Feb 21, 2024
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  10. Merge branch 'load-full-mesh' of github.com:scalableminds/webknossos … 

    …into load-full-mesh
    @normanrz
    normanrz committed Feb 21, 2024
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  11. wip: use segment index for ad-hoc meshing of volume annotations

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    fm3 committed Feb 21, 2024
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  12. Merge branch 'load-full-mesh' of github.com:scalableminds/webknossos … 

    …into load-full-mesh
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    fm3 committed Feb 21, 2024
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Commits on Feb 22, 2024

  1. dev_install

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    fm3 committed Feb 22, 2024
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Commits on Mar 4, 2024

  1. Merge branch 'master' into load-full-mesh

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    fm3 committed Mar 4, 2024
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  2. fetch voxel size from datastore

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    fm3 committed Mar 4, 2024
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Commits on Mar 7, 2024

  1. Merge branch 'master' into load-full-mesh

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    fm3 committed Mar 7, 2024
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  2. in tracingstore ad-hoc, use segment index if it exists

    @fm3
    fm3 committed Mar 7, 2024
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  3. cleanup

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    fm3 committed Mar 7, 2024
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  4. remove test cpp class, add changelog entry

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    fm3 committed Mar 7, 2024
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  5. format

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    fm3 committed Mar 7, 2024
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  6. fix moved class reference

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    fm3 committed Mar 7, 2024
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Commits on Mar 8, 2024

  1. Apply suggestions from code review 

    Co-authored-by: Norman Rzepka <code@normanrz.com>
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    fm3 and normanrz committed Mar 8, 2024
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Commits on Mar 11, 2024

  1. move webknossos-native to webknossos-jni. run cpp formatter

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    fm3 committed Mar 11, 2024
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  2. Merge branch 'load-full-mesh' of github.com:scalableminds/webknossos … 

    …into load-full-mesh
    @fm3
    fm3 committed Mar 11, 2024
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  3. Merge branch 'master' into load-full-mesh

    @fm3
    fm3 committed Mar 11, 2024
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