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Sherbrooke Connectivity Imaging Lab

The lab is headed by Professor Maxime Descoteaux, Ph.D and focuses on brain connectivity from state-of-the-art diffusion MRI.

Sherbrooke Connectivity Imaging Laboratory

The lab is headed by Professor Maxime Descoteaux, Ph.D and focuses on brain connectivity from state-of-the-art diffusion MRI acquisition, reconstruction, tractography, processing and visualization. The aim of the SCIL is to better understand structural connectivity, develop novel tractography algorithms, validate them and use them for human brain mapping and connectomics applications.

Useful links:

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  1. scilpy scilpy Public

    The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox

    Python 55 59

  2. tractoflow tractoflow Public

    TractoFlow: A robust, efficient and reproducible diffusion MRI pipeline leveraging Nextflow & Singularity

    Nextflow 50 21

  3. scil-documentation scil-documentation Public

    Documentation for the SCIL

    Python 3 15

Repositories

Showing 10 of 50 repositories
  • scilpy Public

    The Sherbrooke Connectivity Imaging Lab (SCIL) Python dMRI processing toolbox

    scilus/scilpy’s past year of commit activity
    Python 55 59 44 12 Updated Jul 23, 2024
  • nf-scil Public

    SCIL Nextflow Toolbox

    scilus/nf-scil’s past year of commit activity
    Nextflow 1 GPL-3.0 17 9 9 Updated Jul 23, 2024
  • scilus/tractometry_flow’s past year of commit activity
    Nextflow 0 11 1 0 Updated Jul 23, 2024
  • scil-documentation Public

    Documentation for the SCIL

    scilus/scil-documentation’s past year of commit activity
    Python 3 15 7 2 Updated Jul 20, 2024
  • bst_flow Public

    Bundle Specific Tractography pipeline

    scilus/bst_flow’s past year of commit activity
    Nextflow 0 MIT 3 0 0 Updated Jul 16, 2024
  • scilus/nft-nifti’s past year of commit activity
    0 MIT 1 0 1 Updated Jul 11, 2024
  • scilus/freesurfer_flow’s past year of commit activity
    Nextflow 0 MIT 3 1 1 Updated Jul 8, 2024
  • scilus/noddi_flow’s past year of commit activity
    Nextflow 0 MIT 1 0 1 Updated Jun 25, 2024
  • scilus/neurogister’s past year of commit activity
    Python 0 1 0 0 Updated Jun 21, 2024
  • scilus/combine_flows’s past year of commit activity
    Shell 0 5 1 2 Updated Jun 7, 2024

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