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Adding PCA script for dimension reduction of metrics #673

Merged
merged 22 commits into from
Mar 7, 2023
Merged

Adding PCA script for dimension reduction of metrics #673

merged 22 commits into from
Mar 7, 2023

Commits on Mar 1, 2023

  1. Added pca script

    @gagnonanthony
    gagnonanthony committed Mar 1, 2023
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  2. Added alternative input structure support

    @gagnonanthony
    gagnonanthony committed Mar 1, 2023
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  3. Fix typo in script description

    @gagnonanthony
    gagnonanthony committed Mar 1, 2023
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  4. Added required = true to --list_ids

    @gagnonanthony
    gagnonanthony committed Mar 1, 2023
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  5. Fixed PEP8 errors

    @gagnonanthony
    gagnonanthony committed Mar 1, 2023
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  6. Fixed PEP8 errors

    @gagnonanthony
    gagnonanthony committed Mar 1, 2023
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  7. Fixed typo

    @gagnonanthony
    gagnonanthony committed Mar 1, 2023
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  8. Added new test data and fixed test functions

    @gagnonanthony
    gagnonanthony committed Mar 1, 2023
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  9. Modified handling of subjects files and removed unused function

    @gagnonanthony
    gagnonanthony committed Mar 1, 2023
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Commits on Mar 2, 2023

  1. modified according to the comments

    @gagnonanthony
    gagnonanthony committed Mar 2, 2023
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Commits on Mar 6, 2023

  1. added overwrite option in test.

    @gagnonanthony
    gagnonanthony committed Mar 6, 2023
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Commits on Mar 7, 2023

  1. Updated example input structure

    @gagnonanthony
    gagnonanthony committed Mar 7, 2023
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  2. Updated example input structure

    @gagnonanthony
    gagnonanthony committed Mar 7, 2023
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  3. Added interpretation example

    @gagnonanthony
    gagnonanthony committed Mar 7, 2023
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  4. Fix import order

    @gagnonanthony
    gagnonanthony committed Mar 7, 2023
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  5. Change saving directory for output folder

    @gagnonanthony
    gagnonanthony committed Mar 7, 2023
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  6. Specifying help for --metrics and --list_ids

    @gagnonanthony
    gagnonanthony committed Mar 7, 2023
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  7. Changing --common args to --not_only_common

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    gagnonanthony committed Mar 7, 2023
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  8. added specifications in function and removed the f'{}' when unnecessary'

    @gagnonanthony
    gagnonanthony committed Mar 7, 2023
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  9. Fix matplotlib plot display

    @gagnonanthony
    gagnonanthony committed Mar 7, 2023
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  10. Change --connectoflow flag to --input_connectoflow

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    gagnonanthony committed Mar 7, 2023
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  11. Fix test to fit the args change

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    gagnonanthony committed Mar 7, 2023
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