Update COMMIT AMICO - use args.processes

[arnaudbore]

Quick description

Since last version we are able to choose the number of threads used to compute NODDI and COMMIT.
We were not using it. Now we use args.processes

Type of change

Check the relevant options.

• Bug fix (non-breaking change which fixes an issue)
• New feature (non-breaking change which adds functionality)
• Breaking change (fix or feature that would cause existing functionality to not work as expected)
• This change requires a documentation update

Checklist

• My code follows the style guidelines of this project (run autopep8)
• I added relevant citations to scripts, modules and functions docstrings and descriptions
• I have performed a self-review of my code
• I have commented my code, particularly in hard-to-understand areas
• I have made corresponding changes to the documentation
• My changes generate no new warnings
• I moved all functions from the script file (except the argparser and main) to scilpy modules
• I have added tests that prove my fix is effective or that my feature works
• New and existing unit tests pass locally with my changes

[pep8speaks]

Hello @arnaudbore, Thank you for updating !

There are currently no PEP 8 issues detected in this Pull Request. Cheers! 🍻

Comment last updated at 2024-06-29 14:54:40 UTC

[codecov]

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 68.35%. Comparing base (17b9a4a) to head (699deef).
Report is 44 commits behind head on master.

Additional details and impacted files

@@            Coverage Diff             @@
##           master     #998      +/-   ##
==========================================
+ Coverage   68.14%   68.35%   +0.20%     
==========================================
  Files         419      420       +1     
  Lines       21369    21444      +75     
  Branches     3216     3215       -1     
==========================================
+ Hits        14561    14657      +96     
+ Misses       5533     5527       -6     
+ Partials     1275     1260      -15     

Components	Coverage Δ
Scripts	69.30% <100.00%> (+0.16%)	⬆️
Library	66.96% <ø> (+0.29%)	⬆️

[EmmaRenauld]

If you're changing versions...

Here's what I had to change to be able to use scilpy on Beluga. Can we put scipy 1.11?

[EmmaRenauld]

Did not test, but looks ok!