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Expose random_state in leiden #102

Merged
merged 8 commits into from
Dec 13, 2023
Merged

Expose random_state in leiden #102

merged 8 commits into from
Dec 13, 2023

Commits on Dec 3, 2023

  1. Expose random_state in leiden

    feat(leiden): expose additional parameter
    
    1) expose 'random_state' parameter to better align with Scanpy
    2) pass it to cuGraph via 'culeiden'
    3) save its value in '.uns["leiden"]["params"]'
    4) describe it in docstring
    5) make multiple small improvements to docstring
    
    N.b., the 'theta' parameter was not exposed because a bug in cuGraph (present at commit 1e446c4) makes it have no effect; this should be re-visited when cuGraph is updated.
    jpintar committed Dec 3, 2023
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  3. Fix undefined type

    fix(leiden): fix undefined type
    
    Import 'Union' from 'typing' to fix error when defining 'random_state' (line 17)
    jpintar committed Dec 3, 2023
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Commits on Dec 11, 2023

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Commits on Dec 12, 2023

  1. Update _clustering.py

    Intron7 committed Dec 12, 2023
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  3. Create 0.9.4.md

    Release note describing addition of `random_state` parameter to `leiden`
    jpintar committed Dec 12, 2023
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  4. Update index.md

    Include 0.9.4.md
    jpintar committed Dec 12, 2023
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