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Fix diffmap plotting #2280

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ivirshup
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Alternative to #2255

Fixes #2254, #2227

Puts all the diffmap specific logic inside the diffmap plotting function.

TODO

  • consider the components argument
  • tests (cause it has none apparently)

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codecov bot commented Jun 15, 2022

Codecov Report

Merging #2280 (0519a71) into master (692c9e5) will not change coverage.
The diff coverage is 50.00%.

Additional details and impacted files
@@           Coverage Diff           @@
##           master    #2280   +/-   ##
=======================================
  Coverage   72.14%   72.14%           
=======================================
  Files         104      104           
  Lines       11678    11678           
=======================================
  Hits         8425     8425           
  Misses       3253     3253           
Impacted Files Coverage Δ
scanpy/plotting/_tools/scatterplots.py 87.20% <50.00%> (ø)

@dburkhardt
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@ivirshup what's needed to get this closed? Can I help?

@ivirshup ivirshup modified the milestones: 1.9.2, 1.9.3 Feb 16, 2023
@flying-sheep
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I think it just needs a test

@flying-sheep flying-sheep modified the milestones: 1.9.3, 1.9.4 Jul 21, 2023
@flying-sheep flying-sheep modified the milestones: 1.9.4, 1.9.5 Aug 24, 2023
@ivirshup ivirshup modified the milestones: 1.9.5, 1.9.6 Sep 8, 2023
@flying-sheep flying-sheep modified the milestones: 1.9.6, 1.9.7 Oct 31, 2023
@flying-sheep flying-sheep modified the milestones: 1.9.7, 1.9.8, 1.9.9 Jan 25, 2024
@ivirshup ivirshup modified the milestones: 1.9.9, 1.10.0 Feb 22, 2024
@flying-sheep flying-sheep modified the milestones: 1.10.0, 1.11.0 Feb 22, 2024
@flying-sheep flying-sheep modified the milestones: 1.11.0, 1.10.2 Jun 3, 2024
@ilan-gold ilan-gold removed this from the 1.10.2 milestone Jun 25, 2024
@ilan-gold ilan-gold added this to the 1.10.3 milestone Jun 25, 2024
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Error when repeating the tutorial for diffusion map in v1.9.1 scanpy
4 participants