Compatibility with Palantir>=v1.3.0 #2672
Merged
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This PR resolves Issue #2608 in Scanpy by ensuring compatibility with both Palantir v1.3.0 (function signature) and its earlier versions. This is achieved by substituting the initial keyword argument (
data_df
) with a positional argument.The change aligns with Palantir v1.3.0's new optionality to accept AnnData objects as the first argument, making the keyword
data_df
potentially misleading. Adopting a positional argument ensures compatibility with both new and prior versions of Palantir.