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Implement dev container for Codespaces #1836

Merged
merged 27 commits into from Jan 31, 2023
Merged

Implement dev container for Codespaces #1836

merged 27 commits into from Jan 31, 2023

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martinkim0
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Closes #1835

@martinkim0 martinkim0 mentioned this pull request Jan 5, 2023
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codecov bot commented Jan 5, 2023

Codecov Report

Base: 90.42% // Head: 90.42% // No change to project coverage 👍

Coverage data is based on head (de6b63f) compared to base (2681234).
Patch has no changes to coverable lines.

Additional details and impacted files
@@           Coverage Diff           @@
##             main    #1836   +/-   ##
=======================================
  Coverage   90.42%   90.42%           
=======================================
  Files         142      142           
  Lines       11097    11097           
=======================================
  Hits        10034    10034           
  Misses       1063     1063           

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{
"name": "Python 3",
// Or use a Dockerfile or Docker Compose file. More info: https://containers.dev/guide/dockerfile
"image": "mcr.microsoft.com/devcontainers/python:0-3.8",
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might want python 3.10 though

COPY . .

RUN pip install --upgrade pip
RUN pip install "https://storage.googleapis.com/jax-releases/nocuda/jaxlib-0.4.1-cp310-cp310-manylinux2014_x86_64.whl"
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can you install mambaforge, mamba install scvi tools, then pip editable install?

"extensions": [
"EditorConfig.EditorConfig",
"ms-python.python",
"mhutchie.git-graph"
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actually let's do git lens instead of git graph, as it comes with a graph

@martinkim0 martinkim0 merged commit e361b64 into main Jan 31, 2023
@martinkim0 martinkim0 deleted the container-1835 branch January 31, 2023 22:06
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Implement GitHub Codespaces dev container
2 participants