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1. Alleloscope Alleloscope Public

   Alleloscope is a method for allele-specific copy number estimation that can be applied to single cell DNA and ATAC sequencing data (separately or in combination). Allele-specific estimation allows …

   R 26 6

2. Clonalscope Clonalscope Public

   Clonalscope is a subclone detection method based on copy number alterations (CNAs) for single-cell and ST tumor sequencing data. Clonalscope is able to detect subclones, label malignant cells, and …

   R 12

3. Basic_CNV_SNV Basic_CNV_SNV Public

   Basic functions to help single-cell CNV and SNV analysis.

   Python 2

4. Planet Planet Public

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5. catboost catboost Public

   Forked from catboost/catboost

   A fast, scalable, high performance Gradient Boosting on Decision Trees library, used for ranking, classification, regression and other machine learning tasks for Python, R, Java, C++. Supports comp…

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6. GBDT-uncertainty GBDT-uncertainty Public

   Forked from yandex-research/GBDT-uncertainty

   Jupyter Notebook