Sanitizer #64
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| name: Sanitizer | |
| on: | |
| schedule: | |
| - cron: "0 6 * * SAT" | |
| workflow_dispatch: | |
| concurrency: | |
| group: sanitizer-${{ github.ref }} | |
| cancel-in-progress: true | |
| env: | |
| SHARG_NO_VERSION_CHECK: 1 | |
| TZ: Europe/Berlin | |
| ASAN_OPTIONS: strict_string_checks=1:detect_stack_use_after_return=1:check_initialization_order=1:strict_init_order=1 | |
| TSAN_OPTIONS: ignore_noninstrumented_modules=1 | |
| UBSAN_OPTIONS: print_stacktrace=1 | |
| defaults: | |
| run: | |
| shell: bash -Eeuxo pipefail {0} | |
| jobs: | |
| build: | |
| name: ${{ matrix.name }} ${{ matrix.build_type }} | |
| runs-on: ubuntu-22.04 | |
| timeout-minutes: 240 | |
| if: github.repository_owner == 'seqan' || github.event_name == 'workflow_dispatch' | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| name: [AddressSanitizer, ThreadSanitizer, UndefinedBehaviorSanitizer] | |
| build_type: [Release, Debug] | |
| include: | |
| - name: "AddressSanitizer" | |
| compiler: gcc-13 | |
| cxx_flags: "-std=c++23 -fno-omit-frame-pointer -fsanitize=address -Wno-maybe-uninitialized -Wno-interference-size" | |
| - name: "ThreadSanitizer" | |
| compiler: clang-17 | |
| cxx_flags: "-std=c++20 -fno-omit-frame-pointer -fsanitize=thread" | |
| - name: "UndefinedBehaviorSanitizer" | |
| compiler: gcc-13 | |
| cxx_flags: "-std=c++23 -fno-omit-frame-pointer -fsanitize=undefined -Wno-interference-size" | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| with: | |
| path: raptor | |
| fetch-depth: 1 | |
| submodules: true | |
| - name: Setup compiler | |
| uses: seqan/actions/setup-compiler@main | |
| with: | |
| compiler: ${{ matrix.compiler }} | |
| - name: Install OpenMP | |
| if: contains(matrix.compiler, 'clang') | |
| run: | | |
| install libomp-17-dev | |
| echo "OMP_TOOL_LIBRARIES=/usr/lib/llvm-17/lib/libarcher.so" >> "$GITHUB_ENV" | |
| - name: Configure OS | |
| run: | | |
| sudo bash -c "echo 0 > /proc/sys/vm/overcommit_memory" | |
| sudo bash -c "echo 2 >/proc/sys/kernel/randomize_va_space" | |
| - name: Install CMake | |
| uses: seqan/actions/setup-cmake@main | |
| with: | |
| cmake: 3.21.7 | |
| - name: Configure tests | |
| run: | | |
| mkdir build | |
| cd build | |
| cmake ../raptor/test/unit -DCMAKE_BUILD_TYPE=${{ matrix.build_type }} \ | |
| -DCMAKE_CXX_FLAGS="${{ matrix.cxx_flags }}" | |
| make -j2 gtest_main | |
| - name: Build tests | |
| run: | | |
| cd build | |
| make -k -j2 | |
| - name: Run tests | |
| run: | | |
| cd build | |
| ctest . -j2 --output-on-failure | |