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Merge pull request #383 from eseiler/infra/update_submodule
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[INFRA] Update submodules
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@eseiler
eseiler committed Sep 29, 2023
2 parents d8ae046 + 9c15c57 commit 042c20d
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Showing 2 changed files with 2 additions and 2 deletions.
2 changes: 1 addition & 1 deletion include/raptor/contrib/std
Submodule std updated 3 files
+3 −3 chunk_view.hpp
+2 −2 join_with_view.hpp
+3 −2 zip_view.hpp
2 changes: 1 addition & 1 deletion lib/seqan3
Submodule seqan3 updated 75 files
+2 −2 .github/workflows/ci_cmake.yml
+2 −2 .github/workflows/ci_coverage.yml
+2 −2 .github/workflows/ci_documentation.yml
+7 −2 .github/workflows/ci_linux.yml
+2 −2 .github/workflows/ci_macos.yml
+2 −2 .github/workflows/ci_misc.yml
+2 −2 .github/workflows/cron_api.yml
+2 −2 .github/workflows/cron_avx2.yml
+2 −2 .github/workflows/cron_latest_libraries.yml
+1 −1 .github/workflows/deploy_documentation.yaml
+2 −2 .github/workflows/ram_usage.yml
+2 −2 .github/workflows/update_cookbook.yml
+2 −10 build_system/seqan3-config.cmake
+1 −1 include/seqan3/alignment/configuration/align_config_on_result.hpp
+1 −1 include/seqan3/alignment/matrix/detail/trace_matrix_full.hpp
+0 −1 include/seqan3/alignment/pairwise/alignment_algorithm.hpp
+2 −2 include/seqan3/alignment/pairwise/alignment_result.hpp
+1 −1 include/seqan3/alignment/pairwise/detail/concept.hpp
+1 −1 include/seqan3/alignment/pairwise/detail/policy_alignment_result_builder.hpp
+30 −13 include/seqan3/alphabet/composite/alphabet_variant.hpp
+6 −4 include/seqan3/alphabet/composite/semialphabet_any.hpp
+1 −1 include/seqan3/alphabet/views/translate_join.hpp
+6 −6 include/seqan3/argument_parser/argument_parser.hpp
+1 −4 include/seqan3/argument_parser/detail/format_parse.hpp
+0 −3 include/seqan3/contrib/parallel/serialised_resource_pool.hpp
+3 −3 include/seqan3/contrib/std/chunk_view.hpp
+2 −2 include/seqan3/contrib/std/join_with_view.hpp
+3 −2 include/seqan3/contrib/std/zip_view.hpp
+1 −2 include/seqan3/contrib/stream/bz2_ostream.hpp
+1 −2 include/seqan3/contrib/stream/gz_ostream.hpp
+3 −3 include/seqan3/core/algorithm/detail/execution_handler_parallel.hpp
+10 −2 include/seqan3/core/platform.hpp
+1 −1 include/seqan3/io/sam_file/detail/format_sam_base.hpp
+6 −9 include/seqan3/io/sam_file/format_sam.hpp
+6 −12 include/seqan3/io/sam_file/header.hpp
+0 −13 include/seqan3/io/sam_file/sam_tag_dictionary.hpp
+1 −1 include/seqan3/search/configuration/on_result.hpp
+1 −1 include/seqan3/search/detail/policy_search_result_builder.hpp
+3 −1 include/seqan3/search/fm_index/fm_index.hpp
+2 −2 include/seqan3/search/search_result.hpp
+1 −0 include/seqan3/utility/container/aligned_allocator.hpp
+2 −1 include/seqan3/utility/container/small_string.hpp
+10 −10 include/seqan3/utility/parallel/detail/reader_writer_manager.hpp
+1 −1 include/seqan3/utility/simd/detail/builtin_simd_intrinsics.hpp
+2 −2 include/seqan3/utility/simd/detail/simd_algorithm_avx2.hpp
+1 −1 include/seqan3/utility/simd/views/to_simd.hpp
+12 −1 include/seqan3/utility/tuple/split.hpp
+5 −1 include/seqan3/utility/type_traits/basic.hpp
+1 −1 include/seqan3/utility/views/interleave.hpp
+1 −1 include/seqan3/utility/views/pairwise_combine.hpp
+10 −5 include/seqan3/utility/views/repeat.hpp
+1 −1 test/unit/alignment/configuration/align_config_common_test.cpp
+1 −1 test/unit/alignment/decorator/gap_decorator_test.cpp
+1 −1 test/unit/alignment/scoring/scoring_scheme_test.cpp
+20 −20 test/unit/alphabet/composite/alphabet_variant_test.cpp
+39 −37 test/unit/alphabet/composite/composite_integration_test.cpp
+1 −1 test/unit/alphabet/container/bitpacked_sequence_test.cpp
+1 −1 test/unit/argument_parser/detail/format_help_test.cpp
+2 −2 test/unit/contrib/parallel/buffer_queue_parallel_test.cpp
+0 −1 test/unit/core/configuration/pipeable_config_element_test.cpp
+1 −2 test/unit/core/range/detail/adaptor_for_view_without_args_test.cpp
+1 −1 test/unit/io/sam_file/format_bam_test.cpp
+9 −1 test/unit/io/sam_file/sam_file_format_test_template.hpp
+50 −50 test/unit/io/sequence_file/sequence_file_format_fastq_test.cpp
+57 −57 test/unit/io/structure_file/format_vienna_test.cpp
+3 −2 test/unit/io/views/detail/take_until_view_test.cpp
+1 −1 test/unit/search/configuration/search_config_common_test.cpp
+0 −2 test/unit/search/search_scheme_algorithm_test.cpp
+2 −2 test/unit/utility/container/dynamic_bitset_test.cpp
+0 −2 test/unit/utility/detail/bits_of_test.cpp
+2 −2 test/unit/utility/simd/simd_algorithm_test.cpp
+5 −0 test/unit/utility/tuple/pod_tuple_test.cpp
+6 −0 test/unit/utility/tuple/pop_front_test.cpp
+6 −0 test/unit/utility/tuple/split_test.cpp
+4 −0 test/unit/utility/type_traits/basic_test.cpp

1 comment on commit 042c20d

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@vercel vercel bot commented on 042c20d Sep 29, 2023

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Successfully deployed to the following URLs:

raptor – ./

raptor-git-main-seqan.vercel.app
raptor-seqan.vercel.app
seqan-raptor.vercel.app

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