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Bump nf-core/setup-nextflow from 1 to 2 #414

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merged 1 commit into from
Mar 4, 2024

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@dependabot dependabot bot commented on behalf of github Mar 4, 2024

Bumps nf-core/setup-nextflow from 1 to 2.

Release notes

Sourced from nf-core/setup-nextflow's releases.

v2.0.0

Added

  • renovate dependency automation bot (#41)

Changed

  • Upgraded GitHub Actions node version to v20 (#39)
  • GitHub Octokit API switched to nf-core custom API (#37)

v1.5.2

Added

  • CI workflow steps for better compatibility with https://github.com/nektos/act
  • Visual Studio Code debugging configuration
  • Husky pre-commit hooks for linting and formatting
  • Deprecation messages to warn users of upcoming API switch

v1.5.1

Changed

  • API calls are now lazy loaded to avoid making unnecessary calls (#33)

v1.5.0

Added

  • Throttling support to retry failed API calls (#31)

Changed

  • Octokit API calls refactored and separated from install script (#29)

v1.4.0

Changed

  • If fs.renameSync fails (e.g. because source and destination files are on different partitions), try fs.copySync and fs.unlinkSync instead (#14).
  • Fail instead of warn, when `nextflow help`` doesn't work (#23).

Fixed

  • Re-enable npm run test in CI (#15).
  • Fix release version check in unit test (#15).
  • Add helper function for checking the latest releases in the unit tests (#15).

v1.3.0

Changed

  • Action now checks tool cache for installed version before querying Octokit (#5/#10)

v1.2.0

... (truncated)

Changelog

Sourced from nf-core/setup-nextflow's changelog.

Commits

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Bumps [nf-core/setup-nextflow](https://github.com/nf-core/setup-nextflow) from 1 to 2.
- [Release notes](https://github.com/nf-core/setup-nextflow/releases)
- [Changelog](https://github.com/nf-core/setup-nextflow/blob/master/CHANGELOG.md)
- [Commits](nf-core/setup-nextflow@v1...v2)

---
updated-dependencies:
- dependency-name: nf-core/setup-nextflow
  dependency-type: direct:production
  update-type: version-update:semver-major
...

Signed-off-by: dependabot[bot] <support@github.com>
@dependabot dependabot bot added the dependencies Pull requests that update a dependency file label Mar 4, 2024
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@seqan-actions seqan-actions added lint [INTERNAL] used for linting and removed lint [INTERNAL] used for linting labels Mar 4, 2024
@eseiler eseiler enabled auto-merge March 4, 2024 12:24
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codecov bot commented Mar 4, 2024

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 100.00%. Comparing base (41a23c9) to head (de55af5).

Additional details and impacted files
@@            Coverage Diff            @@
##              main      #414   +/-   ##
=========================================
  Coverage   100.00%   100.00%           
=========================================
  Files           51        51           
  Lines         1682      1682           
=========================================
  Hits          1682      1682           

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@eseiler eseiler merged commit cd670a5 into main Mar 4, 2024
29 checks passed
@dependabot dependabot bot deleted the dependabot/github_actions/nf-core/setup-nextflow-2 branch March 4, 2024 12:30
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