[TEST] Adds first simple test case for vectorised alignment algorithm.

* Tests dna sequences of same length.
* Only score and back coordinate can be computed.

test/unit/alignment/pairwise/CMakeLists.txt

@@ -4,6 +4,7 @@ seqan3_test(alignment_result_test.cpp)
 seqan3_test(align_result_selector_test.cpp)
 seqan3_test(alignment_configurator_test.cpp)
 seqan3_test(global_affine_banded_test.cpp)
+seqan3_test(global_affine_unbanded_collection_simd_test.cpp)
 seqan3_test(global_affine_unbanded_collection_test.cpp)
 seqan3_test(global_affine_unbanded_test.cpp)
 seqan3_test(local_affine_banded_test.cpp)

test/unit/alignment/pairwise/global_affine_unbanded_collection_simd_test.cpp

@@ -0,0 +1,44 @@
+// -----------------------------------------------------------------------------------------------------
+// Copyright (c) 2006-2019, Knut Reinert & Freie Universität Berlin
+// Copyright (c) 2016-2019, Knut Reinert & MPI für molekulare Genetik
+// This file may be used, modified and/or redistributed under the terms of the 3-clause BSD-License
+// shipped with this file and also available at: https://github.com/seqan/seqan3/blob/master/LICENSE.md
+// -----------------------------------------------------------------------------------------------------
+
+#include <vector>
+
+#include <gtest/gtest.h>
+
+#include <seqan3/alignment/pairwise/align_pairwise.hpp>
+
+#include "fixture/global_affine_unbanded.hpp"
+#include "pairwise_alignment_collection_test_template.hpp"
+
+using namespace seqan3;
+using namespace seqan3::detail;
+using namespace seqan3::test::alignment;
+
+namespace seqan3::test::alignment::collection::simd::global::affine::unbanded
+{
+
+static auto dna4_01 = []()
+{
+    using fixture_t = decltype(fixture::global::affine::unbanded::dna4_01);
+
+    std::vector<fixture_t> data;
+    for (size_t i = 0; i < 100; ++i)
+        data.push_back(fixture::global::affine::unbanded::dna4_01);
+
+    auto config = fixture::global::affine::unbanded::dna4_01.config | align_cfg::vectorise;
+    return alignment_fixture_collection{config, data};
+}();
+
+} // namespace seqan3::test::alignment::collection::simd::global::affine::unbanded
+
+using pairwise_collection_simd_global_affine_unbanded_testing_types = ::testing::Types<
+        pairwise_alignment_fixture<&collection::simd::global::affine::unbanded::dna4_01>
+    >;
+
+INSTANTIATE_TYPED_TEST_CASE_P(pairwise_collection_simd_global_affine_unbanded,
+                              pairwise_alignment_collection_test,
+                              pairwise_collection_simd_global_affine_unbanded_testing_types);