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Range sequence concept #1898

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merged 2 commits into from
Jun 22, 2020
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smehringer
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@smehringer smehringer requested review from a team and eseiler and removed request for a team June 12, 2020 09:49
include/seqan3/range/concept.hpp Outdated Show resolved Hide resolved
@smehringer smehringer requested a review from eseiler June 12, 2020 10:39
@eseiler eseiler requested a review from rrahn June 12, 2020 10:47
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Only some minor suggestions 💅 , otherwise lgtm 👍

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@marehr
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marehr commented Jun 15, 2020

2020-06-15 Core-Meeting

The Problem:

The sequence concept name has a different from the sequence_container concept. sequence does mean a biological sequence and sequence_container is a named requirement of the standard (see https://en.cppreference.com/w/cpp/named_req/SequenceContainer).

template <typename type>
SEQAN3_CONCEPT sequence_container = requires (type val, type val2, type const cval)
{

Resolution:

We decided some time ago that we want to get rid of all the container concepts that would solve this problem.

Follow-up https://github.com/orgs/seqan/projects/4#card-40096824

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codecov bot commented Jun 18, 2020

Codecov Report

Merging #1898 into master will increase coverage by 0.12%.
The diff coverage is 100.00%.

Impacted file tree graph

@@            Coverage Diff             @@
##           master    #1898      +/-   ##
==========================================
+ Coverage   97.63%   97.75%   +0.12%     
==========================================
  Files         249      252       +3     
  Lines        9481     9551      +70     
==========================================
+ Hits         9257     9337      +80     
+ Misses        224      214      -10     
Impacted Files Coverage Δ
...ment/aligned_sequence/aligned_sequence_concept.hpp 100.00% <ø> (ø)
include/seqan3/core/detail/debug_stream_range.hpp 100.00% <100.00%> (ø)
.../search/detail/unidirectional_search_algorithm.hpp 98.57% <0.00%> (-1.43%) ⬇️
include/seqan3/core/simd/view_to_simd.hpp 91.52% <0.00%> (-1.40%) ⬇️
...e/seqan3/search/detail/search_scheme_algorithm.hpp 93.98% <0.00%> (-0.52%) ⬇️
...de/seqan3/argument_parser/detail/version_check.hpp 92.56% <0.00%> (-0.18%) ⬇️
include/seqan3/core/math.hpp 100.00% <0.00%> (ø)
include/seqan3/alphabet/concept.hpp 100.00% <0.00%> (ø)
include/seqan3/range/views/rank_to.hpp 100.00% <0.00%> (ø)
include/seqan3/search/search_result.hpp 100.00% <0.00%> (ø)
... and 44 more

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4 participants