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[MISC] rename align_cfg::vectorise to align_cfg::vectorised #2026

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merged 3 commits into from
Aug 13, 2020

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wvdtoorn
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@wvdtoorn wvdtoorn changed the base branch from master to release-3.0.2 August 12, 2020 10:51
@wvdtoorn wvdtoorn requested review from a team and eseiler and removed request for a team August 12, 2020 10:51
@wvdtoorn wvdtoorn closed this Aug 12, 2020
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Closed and reopened to trigger jenkins after status 'aborted'.

@wvdtoorn wvdtoorn reopened this Aug 12, 2020
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2 small things

CHANGELOG.md Outdated
@@ -84,6 +84,7 @@ Note that 3.1.0 will be the first API stable release and interfaces in this rele
* The seqan3::align_cfg::mode configuration has been adapted. The algorithm can now be configured using one of the
pipeable configuration elements seqan3::align_cfg::method_global or seqan3::align_cfg::method_local
([\#1918](https://github.com/seqan/seqan3/pull/1918).
* The seqan3::align_cfg::vectorise configuration is now renamed to seqan3::align_cfg::vectorised.
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Suggested change
* The seqan3::align_cfg::vectorise configuration is now renamed to seqan3::align_cfg::vectorised.
* The seqan3::align_cfg::vectorise configuration has been renamed to seqan3::align_cfg::vectorised.

@@ -72,7 +72,7 @@ namespace seqan3
*
* For each sequence pair one or more \ref seqan3::alignment_result "seqan3::alignment_result"s can be computed.
* The seqan3::align_pairwise function returns an seqan3::algorithm_result_generator_range which can be used to iterate over the
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Can you fix the line length here while you're changing the file anyway?

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eseiler commented Aug 12, 2020

Closed and reopened to trigger jenkins after status 'aborted'.

Jenkins nodes seem to be down.

@wvdtoorn wvdtoorn requested a review from a team August 12, 2020 11:43
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LGTM,

change was

  • seqan3::align_cfg::vectorise -> seqan3::align_cfg::vectorised and
  • seqan3::detail::vectorise_tag -> seqan3::detail::vectorised_tag

right?

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marehr commented Aug 12, 2020

@smehringer, @rrahn Ups, didn't see that you weren't assigned by seqan/core. Do you want to review a second time?

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LGTM,

change was

* `seqan3::align_cfg::vectorise` -> `seqan3::align_cfg::vectorised` and

* `seqan3::detail::vectorise_tag` -> `seqan3::detail::vectorised_tag`

right?

Yes, that's right. Should I change the commit message/changelog entry?

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jenkins is working again and pointed out a documentation reference that I missed, fixed.

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codecov bot commented Aug 13, 2020

Codecov Report

Merging #2026 into release-3.0.2 will increase coverage by 0.00%.
The diff coverage is n/a.

Impacted file tree graph

@@              Coverage Diff               @@
##           release-3.0.2    #2026   +/-   ##
==============================================
  Coverage          97.89%   97.89%           
==============================================
  Files                262      263    +1     
  Lines               9863     9879   +16     
==============================================
+ Hits                9655     9671   +16     
  Misses               208      208           
Impacted Files Coverage Δ
...clude/seqan3/alignment/pairwise/align_pairwise.hpp 100.00% <ø> (ø)
...e/seqan3/alignment/pairwise/detail/type_traits.hpp 100.00% <ø> (ø)
...e/seqan3/search/detail/search_scheme_algorithm.hpp 94.53% <0.00%> (-0.03%) ⬇️
include/seqan3/search/search.hpp 100.00% <0.00%> (ø)
include/seqan3/range/views/take_until.hpp 98.24% <0.00%> (ø)
include/seqan3/core/algorithm/configuration.hpp 100.00% <0.00%> (ø)
include/seqan3/search/detail/policy_max_error.hpp 100.00% <0.00%> (ø)
...an3/search/detail/policy_search_result_builder.hpp 100.00% <0.00%> (ø)
.../search/detail/unidirectional_search_algorithm.hpp 100.00% <0.00%> (ø)
.../algorithm/configuration_element_parallel_mode.hpp 100.00% <0.00%> (ø)
... and 1 more

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Looks good 👍

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[Alinment Configuration] Change align_cfg::vectorise to align_cfg::vectorised
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