Using PDM

pyproject.toml

@@ -0,0 +1,34 @@
+[project]
+name = "ctdvis"
+version = "1.0.0"
+description = "Default template for PDM package"
+authors = [
+    {name = "Johannes Johansson", email = "nodc@smhi.se"},
+]
+dependencies = [
+    "pandas>=2.2.2",
+    "bokeh==2.4.2",
+    "pyproj>=3.6.1",
+    "pyyaml>=6.0.1",
+    "matplotlib>=3.8.4",
+    "requests>=2.31.0",
+    "gsw>=3.6.17",
+]
+requires-python = ">=3.11"
+readme = "README.md"
+license = {text = "MIT"}
+
+[build-system]
+requires = ["pdm-backend"]
+build-backend = "pdm.backend"
+
+
+[tool.pdm]
+distribution = true
+
+
+[tool.setuptools.packages.find]
+where = ["src"]
+
+[tool.setuptools.package-data]
+mypkg = ["."]

ctdvis/datahandler.py → src/ctdvis/datahandler.py

@@ -143,6 +143,10 @@ def add_size_columns(self, q_params, mapper=None):
                 self[size_key] = np.vectorize(
                     set_scatter_size)(self[q_para].fillna(''))
 
+    def append(self, df):
+        new_df = pd.concat([self, df])
+        return Frame(new_df)
+
 
 class DataHandler:
     """Handler of data formats.

ctdvis/tools/quality_control.py → src/ctdvis/tools/quality_control.py

@@ -28,6 +28,14 @@
     Panel,
     Tabs
 )
+# from bokeh.models.widgets import Select
+# from bokeh.models.widgets import RangeSlider
+# from bokeh.models.widgets import DataTable
+# from bokeh.models.widgets import TableColumn
+# from bokeh.models.layouts import TabPanel
+# from bokeh.models.layouts import Tabs
+
+
 from bokeh.plotting import figure, show, output_file
 from bokeh.tile_providers import get_provider, Vendors
 from bokeh.core.validation import silence

ctdvis/utils.py → src/ctdvis/utils.py

@@ -5,7 +5,7 @@
 
 @author: a002028
 """
-from collections import Mapping
+from collections.abc import Mapping
 from datetime import datetime
 from pyproj import CRS, transform
 import numpy as np

src/ctdvis/widgets/directory_selection.py

@@ -0,0 +1,78 @@
+#!/usr/bin/env python
+# Copyright (c) 2022 SMHI, Swedish Meteorological and Hydrological Institute.
+# License: MIT License (see LICENSE.txt or http://opensource.org/licenses/mit).
+"""
+Created on 2022-02-09 11:27
+
+@author: johannes
+"""
+# from PyQt5.QtWidgets import QFileDialog, QApplication, QMessageBox
+# from PyQt5.QtGui import QPixmap
+# from PyQt5.QtCore import Qt
+
+import tkinter as tk
+from tkinter import filedialog
+from tkinter import messagebox
+
+
+# class DirectoryWindow(QFileDialog):
+#     """Dialog window for directory selection."""
+#
+#     def __init__(self, folder=None):
+#         """Initiate."""
+#         super().__init__()
+#         self.folder = folder or 'C:/'
+#
+#     def open_dialog(self, *args):
+#         """Set selected directory path."""
+#         path = self.getExistingDirectory(
+#             self, 'Select a directory', self.folder
+#         )
+#         if Path(path).is_dir():
+#             self.folder = path
+
+
+# def old_get_folder_path_from_user():
+#     """Return the selected directory path.
+#
+#     Opens up a diolog window.
+#     """
+#     app = QApplication(sys.argv)  # noqa: F841
+#     dir_selector = DirectoryWindow()
+#     dir_selector.open_dialog()
+#     return dir_selector.folder
+#
+#
+# def old_message_box(text, icon_path=None):
+#     """Return dialog window.
+#
+#     Args:
+#         text: Text.
+#         picture_path: Path to file.
+#     """
+#     app = QApplication(sys.argv)  # noqa: F841
+#     msgbox = QMessageBox()
+#     msgbox.setWindowTitle("Profile QC-tool")
+#     msgbox.setText(text)
+#     if icon_path:
+#         msgbox.setIconPixmap(QPixmap(icon_path))
+#     msgbox.setWindowFlags(Qt.WindowStaysOnTopHint)
+#     msgbox.exec_()
+
+
+def get_folder_path_from_user():
+    try:
+        return filedialog.askdirectory()
+    except:
+        root = tk.Tk()
+        root.withdraw()
+        return filedialog.askdirectory()
+
+
+def message_box(text, icon_path=None):
+    try:
+        messagebox.showinfo('Meddelande', text)
+    except:
+        root = tk.Tk()
+        root.withdraw()
+        messagebox.showinfo('Meddelande', text)