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KMCP v0.9.3
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@shenwei356 shenwei356 released this 16 Jul 03:21
· 11 commits to main since this release
v0.9.3
4c45a45

Changes

v0.9.3 - 2023-07-16 Github Releases (by Release)

  • kmcp compute/split-genomes:

    • fix a bug in chunk computation when splitting circular genomes (--circular).

  • kmcp search/merge:

    • append simple stats to the search result as comment lines, including the number of input and matched queries. e.g.,

        # input queries: 930254
  # matched queries: 923820
  # matched percentage: 99.3084%

  • kmcp profile:

    • fix metaphlan out format. #34

    • show stats of the number of input and matched queries in log. It would be helpful to show whether the reference genomes cover all microorganisms in the sample.

        20:00:55.295 [INFO] 99.3084% (923820/930254) reads matched
  20:00:55.295 [INFO] 100.0000% (923820/923820) matched reads belong to the 2 references in the profile

  • new tutorials:

Assets 7