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Vignette How to Visualize Results from Jurkat Analysis

Anne Deslattes Mays edited this page Jul 26, 2021 · 33 revisions

In this vignette, the user will be guided through the steps necessary to visualise the results outlined in the manuscript for Figure 4d-f:

Figure 4d-f - Customized long-read-derived protein database for protein isoform detection

The data for this figure is found using the sharable link generated by executing the Nextflow workflow on Lifebit's CloudOS platform.

Using this platform, we are able to share the results using a publicly available and accessible link.

Lifebit CloudOS Jurkat Run Results

Using this link, we will navigate to each of the files generated, to enable users to reproduce Figure 4d-f presented in the manuscript and perform the following steps to reproduce the figure above:

  1. Download Lifebit CloudOS Jurkat Run Results
  2. Upload Jurkat Run Results to the UCSC browser
  3. Reproduce Figure 4d
  4. Reproduce Figure 4e
  5. Reproduce Figure 4f