Linear Algebra infra #2209
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| /* | ||
| * Copyright (c) 2014, Shogun Toolbox Foundation | ||
| * All rights reserved. | ||
| * | ||
| * Written (W) 2014 Sunil K. Mahendrakar | ||
| * | ||
| * Redistribution and use in source and binary forms, with or without | ||
| * modification, are permitted provided that the following conditions are met: | ||
|
|
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| * 1. Redistributions of source code must retain the above copyright notice, | ||
| * this list of conditions and the following disclaimer. | ||
| * | ||
| * 2. Redistributions in binary form must reproduce the above copyright notice, | ||
| * this list of conditions and the following disclaimer in the documentation | ||
| * and/or other materials provided with the distribution. | ||
| * | ||
| * 3. Neither the name of the copyright holder nor the names of its | ||
| * contributors may be used to endorse or promote products derived from this | ||
| * software without specific prior written permission. | ||
|
|
||
| * THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" | ||
| * AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE | ||
| * IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE | ||
| * ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE | ||
| * LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR | ||
| * CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF | ||
| * SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS | ||
| * INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN | ||
| * CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) | ||
| * ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE | ||
| * POSSIBILITY OF SUCH DAMAGE. | ||
| * | ||
| */ | ||
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| #include <shogun/lib/config.h> | ||
| #include <shogun/mathematics/linalg/dotproduct/VectorDotOperator.h> | ||
| #include<shogun/lib/SGVector.h> | ||
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| namespace shogun | ||
| { | ||
| template class VectorDotOperator<int8_t, SGVector<int8_t> >; | ||
| template class VectorDotOperator<uint8_t, SGVector<uint8_t> >; | ||
| template class VectorDotOperator<int16_t, SGVector<int16_t> >; | ||
| template class VectorDotOperator<uint16_t, SGVector<uint16_t> >; | ||
| template class VectorDotOperator<int32_t, SGVector<int32_t> >; | ||
| template class VectorDotOperator<uint32_t, SGVector<uint32_t> >; | ||
| template class VectorDotOperator<int64_t, SGVector<int64_t> >; | ||
| template class VectorDotOperator<uint64_t, SGVector<uint64_t> >; | ||
| template class VectorDotOperator<float32_t, SGVector<float32_t> >; | ||
| template class VectorDotOperator<float64_t, SGVector<float64_t> >; | ||
| template class VectorDotOperator<floatmax_t, SGVector<floatmax_t> >; | ||
| template class VectorDotOperator<complex128_t, SGVector<complex128_t> >; | ||
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| } |
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| Original file line number | Diff line number | Diff line change |
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| @@ -0,0 +1,96 @@ | ||
| /* | ||
| * Copyright (c) 2014, Shogun Toolbox Foundation | ||
| * All rights reserved. | ||
| * | ||
| * Written (W) 2014 Sunil K. Mahendrakar | ||
| * | ||
| * Redistribution and use in source and binary forms, with or without | ||
| * modification, are permitted provided that the following conditions are met: | ||
|
|
||
| * 1. Redistributions of source code must retain the above copyright notice, | ||
| * this list of conditions and the following disclaimer. | ||
| * | ||
| * 2. Redistributions in binary form must reproduce the above copyright notice, | ||
| * this list of conditions and the following disclaimer in the documentation | ||
| * and/or other materials provided with the distribution. | ||
| * | ||
| * 3. Neither the name of the copyright holder nor the names of its | ||
| * contributors may be used to endorse or promote products derived from this | ||
| * software without specific prior written permission. | ||
|
|
||
| * THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" | ||
| * AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE | ||
| * IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE | ||
| * ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE | ||
| * LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR | ||
| * CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF | ||
| * SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS | ||
| * INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN | ||
| * CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) | ||
| * ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE | ||
| * POSSIBILITY OF SUCH DAMAGE. | ||
| * | ||
| */ | ||
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| #ifndef DENSE_VECTOR_DOT_OPERATOR_H_ | ||
| #define DENSE_VECTOR_DOT_OPERATOR_H_ | ||
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| #include <shogun/lib/config.h> | ||
| #include<shogun/mathematics/linalg/global/LinearAlgebra.h> | ||
| #include<shogun/mathematics/linalg/linop/LinearOperator.h> | ||
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| namespace shogun | ||
| { | ||
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| /** @brief Abstract template base class that represents a Vector Dot operator | ||
| */ | ||
| template <class T, class Vector> | ||
| class VectorDotOperator : public CLinearOperator<T, Vector> | ||
| { | ||
| public: | ||
| /** Default Constructor | ||
| * @param vec input vector on which the dot operator can apply | ||
| */ | ||
| VectorDotOperator(Vector vec) | ||
| : CLinearOperator<T, Vector>(), vector(vec) | ||
| { | ||
| linalg=new CLinearAlgebra(); | ||
|
There was a problem hiding this comment. @lambday do we make this a singleton or as usual a global? tried making it global(in last commit) but seems to give a segfault when constructor is called(ran gdb source seems to be sg_io variable will take a look.) but this way it works fine. |
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| SG_REF(linalg); | ||
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| SG_SGCDEBUG("%s created (%p)\n", this->get_name(), this) | ||
| } | ||
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| /** Abstract method that applies the dot operator to a vector | ||
| * (\f$\sum_{i=1}^d a_ib_i$ where $a,b$ are $d$-dimensional vectors) | ||
| * @param other the operand vector to which the dot operator applies | ||
| * @return the result | ||
| */ | ||
| virtual T apply(Vector other) const | ||
| { | ||
| return linalg->get_dot_computer<T, Vector>()->compute(vector, other); | ||
| } | ||
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| /** @return object name */ | ||
| virtual const char* get_name() const | ||
| { | ||
| return "VectorDotOperator"; | ||
| } | ||
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| /** Destructor */ | ||
| virtual ~VectorDotOperator() | ||
| { | ||
| SG_UNREF(linalg); | ||
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| SG_SGCDEBUG("%s destroyed (%p)\n", this->get_name(), this) | ||
| } | ||
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| private: | ||
| /** The input vector on which the dot operator can apply */ | ||
| Vector vector; | ||
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| /** The Linear Algebra class */ | ||
| CLinearAlgebra* linalg; | ||
| }; | ||
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| } | ||
| #endif //DENSE_VECTOR_DOT_OPERATOR_H_ | ||
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,167 @@ | ||
| /* | ||
| * Copyright (c) 2014, Shogun Toolbox Foundation | ||
| * All rights reserved. | ||
| * | ||
| * Written (W) 2014 Sunil K. Mahendrakar | ||
| * | ||
| * Redistribution and use in source and binary forms, with or without | ||
| * modification, are permitted provided that the following conditions are met: | ||
|
|
||
| * 1. Redistributions of source code must retain the above copyright notice, | ||
| * this list of conditions and the following disclaimer. | ||
| * | ||
| * 2. Redistributions in binary form must reproduce the above copyright notice, | ||
| * this list of conditions and the following disclaimer in the documentation | ||
| * and/or other materials provided with the distribution. | ||
| * | ||
| * 3. Neither the name of the copyright holder nor the names of its | ||
| * contributors may be used to endorse or promote products derived from this | ||
| * software without specific prior written permission. | ||
|
|
||
| * THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" | ||
| * AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE | ||
| * IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE | ||
| * ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE | ||
| * LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR | ||
| * CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF | ||
| * SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS | ||
| * INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN | ||
| * CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) | ||
| * ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE | ||
| * POSSIBILITY OF SUCH DAMAGE. | ||
| * | ||
| */ | ||
|
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| #include<shogun/mathematics/linalg/global/LinearAlgebra.h> | ||
| #include<shogun/lib/DataType.h> | ||
| #include<shogun/lib/SGVector.h> | ||
| #include<shogun/mathematics/linalg/dotproduct/DenseEigen3DotProduct.h> | ||
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| namespace shogun | ||
| { | ||
| CLinearAlgebra::CLinearAlgebra() : CSGObject() | ||
| { | ||
| init(); | ||
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| SG_GCDEBUG("%s created (%p)\n", this->get_name(), this) | ||
| } | ||
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| CLinearAlgebra::~CLinearAlgebra() | ||
| { | ||
| delete_all_dot_computers(); | ||
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| for(int i=0; i < 2; ++i) | ||
| delete dot_computers[i]; | ||
| delete dot_computers; | ||
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| SG_GCDEBUG("%s destroyed (%p)\n", this->get_name(), this) | ||
| } | ||
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| void CLinearAlgebra::init() | ||
| { | ||
| dot_computers=NULL; | ||
| #ifdef HAVE_EIGEN3 | ||
| set_backend(Eigen3); | ||
| #endif | ||
| } | ||
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| void CLinearAlgebra::set_backend(ELinAlgBackend linalg_backend) | ||
| { | ||
| if(dot_computers) | ||
| { | ||
| delete_all_dot_computers(); | ||
| } | ||
| else | ||
| { | ||
| dot_computers=new void**[2](); | ||
| for(int i=0; i < 2; ++i) | ||
| dot_computers[i]=new void*[12]; | ||
| } | ||
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| switch (linalg_backend) | ||
| { | ||
| #ifdef HAVE_EIGEN3 | ||
| case Eigen3: | ||
| dot_computers[PT_SGVector][PT_INT8]= | ||
| new DenseEigen3DotProduct<int8_t>(); | ||
| dot_computers[PT_SGVector][PT_UINT8]= | ||
| new DenseEigen3DotProduct<uint8_t>(); | ||
| dot_computers[PT_SGVector][PT_INT16]= | ||
| new DenseEigen3DotProduct<int16_t>(); | ||
| dot_computers[PT_SGVector][PT_UINT16]= | ||
| new DenseEigen3DotProduct<uint16_t>(); | ||
| dot_computers[PT_SGVector][PT_INT32]= | ||
| new DenseEigen3DotProduct<int32_t>(); | ||
| dot_computers[PT_SGVector][PT_UINT32]= | ||
| new DenseEigen3DotProduct<uint32_t>(); | ||
| dot_computers[PT_SGVector][PT_INT64]= | ||
| new DenseEigen3DotProduct<int64_t>(); | ||
| dot_computers[PT_SGVector][PT_UINT64]= | ||
| new DenseEigen3DotProduct<uint64_t>(); | ||
| dot_computers[PT_SGVector][PT_FLOAT32]= | ||
| new DenseEigen3DotProduct<float32_t>(); | ||
| dot_computers[PT_SGVector][PT_FLOAT64]= | ||
| new DenseEigen3DotProduct<float64_t>(); | ||
| dot_computers[PT_SGVector][PT_FLOATMAX]= | ||
| new DenseEigen3DotProduct<floatmax_t>(); | ||
| dot_computers[PT_SGVector][PT_COMPLEX128]= | ||
| new DenseEigen3DotProduct<complex128_t>(); | ||
| break; | ||
| #endif | ||
|
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| default: | ||
| break; | ||
| } | ||
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| } | ||
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| template<class T, class Vector> | ||
| VectorDotProduct<T, Vector>* CLinearAlgebra::get_dot_computer() | ||
| { | ||
| } | ||
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| template<class T, class Vector> | ||
| void CLinearAlgebra::delete_dot_computer() | ||
| { | ||
| } | ||
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| #define DOT_COMPUTER(T, Vector, PTYPE, VectorType) \ | ||
| template<> \ | ||
| void CLinearAlgebra::delete_dot_computer<T, Vector >() \ | ||
| {\ | ||
| delete static_cast<VectorDotProduct<T, Vector>*>(dot_computers[VectorType][PTYPE]); \ | ||
| }\ | ||
| template<> \ | ||
| VectorDotProduct<T, Vector>* CLinearAlgebra::get_dot_computer<T, Vector >() \ | ||
| { \ | ||
| return reinterpret_cast<VectorDotProduct<T, Vector >*>(dot_computers[VectorType][PTYPE]); \ | ||
| } | ||
| DOT_COMPUTER(int8_t, SGVector<int8_t>, PT_INT8, PT_SGVector) | ||
| DOT_COMPUTER(uint8_t, SGVector<uint8_t>, PT_UINT8, PT_SGVector) | ||
| DOT_COMPUTER(int16_t, SGVector<int16_t>, PT_INT16, PT_SGVector) | ||
| DOT_COMPUTER(uint16_t, SGVector<uint16_t>, PT_UINT16, PT_SGVector) | ||
| DOT_COMPUTER(int32_t, SGVector<int32_t>, PT_INT32, PT_SGVector) | ||
| DOT_COMPUTER(uint32_t, SGVector<uint32_t>, PT_UINT32, PT_SGVector) | ||
| DOT_COMPUTER(int64_t, SGVector<int64_t>, PT_INT64, PT_SGVector) | ||
| DOT_COMPUTER(uint64_t, SGVector<uint64_t>, PT_UINT64, PT_SGVector) | ||
| DOT_COMPUTER(float32_t, SGVector<float32_t>, PT_FLOAT32, PT_SGVector) | ||
| DOT_COMPUTER(float64_t, SGVector<float64_t>, PT_FLOAT64, PT_SGVector) | ||
| DOT_COMPUTER(floatmax_t, SGVector<floatmax_t>, PT_FLOATMAX, PT_SGVector) | ||
| DOT_COMPUTER(complex128_t, SGVector<complex128_t>, PT_COMPLEX128, PT_SGVector) | ||
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| void CLinearAlgebra::delete_all_dot_computers() | ||
| { | ||
| delete_dot_computer<int8_t, SGVector<int8_t> >(); | ||
| delete_dot_computer<uint8_t, SGVector<uint8_t> >(); | ||
| delete_dot_computer<int16_t, SGVector<int16_t> >(); | ||
| delete_dot_computer<uint16_t, SGVector<uint16_t> >(); | ||
| delete_dot_computer<int32_t, SGVector<int32_t> >(); | ||
| delete_dot_computer<uint32_t, SGVector<uint32_t> >(); | ||
| delete_dot_computer<int64_t, SGVector<int64_t> >(); | ||
| delete_dot_computer<uint64_t, SGVector<uint64_t> >(); | ||
| delete_dot_computer<float32_t, SGVector<float32_t> >(); | ||
| delete_dot_computer<float64_t, SGVector<float64_t> >(); | ||
| delete_dot_computer<floatmax_t, SGVector<floatmax_t> >(); | ||
| delete_dot_computer<complex128_t, SGVector<complex128_t> >(); | ||
| } | ||
| } |
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Here VectorDotOperator should be CVectorDotOperator but the class_list.cpp.py script which generates class_list.cpp only supports single template argument. possible solution is to separate DotOperator for SGVector, SGSparseVector, and other GPU vectors or modify .py script to accommodate this but it cannot be generic as we don't know what the template arguments would be. need your help here.