Script used in Iwamoto et al, 2020, BioRxiv manuscript

About

This repository contains the script to generate histogram of base-quality from BAM file in Sakashita et al., 2020, NSMB manuscript.

Files

plot_hist_base_qual.py

This file is used to generate histogram of base-quality from BAM file.

Environment

Ubuntu VERSION="18.04.2 LTS (Bionic Beaver)" GNU bash, version 4.4.19(1)-release (x86_64-pc-linux-gnu) Python 3.7.4 Pysam 0.15.2

License

See file LICENSE for details.