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  1. Nextstrain build for novel coronavirus SARS-CoV-2

    Python 1.1k 289

  2. An interactive explorer for single-cell transcriptomics data

    JavaScript 254 36

  3. Dengue antigenic variation and evolutionary dynamics

    Jupyter Notebook 4 4

  4. Dynamics of cross-species transmission in SIV

    Jupyter Notebook 6 2

  5. All the action is on the course webpage -->

    Jupyter Notebook 7 4

  6. PhD dissertation: "Viral phylodynamics of host adaptation and antigenic evolution"

    TeX 1

234 contributions in the last year

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Contribution activity

October 2020

Created an issue in nextstrain/ncov that received 3 comments

Bring the config specification closer to the CLI args

There are lots of cases where the way parameters are specified in builds.yaml don't quite match up with the corresponding CLI arguments take under …

2 contributions in private repositories Oct 14 – Oct 15

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