-
Notifications
You must be signed in to change notification settings - Fork 0
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Release V0.3 #1
Merged
Release V0.3 #1
Commits on Oct 5, 2021
-
Configuration menu - View commit details
-
Copy full SHA for 6de76ea - Browse repository at this point
Copy the full SHA 6de76eaView commit details
Commits on Sep 20, 2022
-
Configuration menu - View commit details
-
Copy full SHA for 434d463 - Browse repository at this point
Copy the full SHA 434d463View commit details
Commits on Oct 11, 2022
-
Compatibility: * GrowthDynamics 0.6 * Makie 0.17 * Julia 1.6 Note: Last version compat. w/ GrowthDynamics v0.6
Configuration menu - View commit details
-
Copy full SHA for fff542a - Browse repository at this point
Copy the full SHA fff542aView commit details -
- controls for radius filter - controls for plane view
Configuration menu - View commit details
-
Copy full SHA for d9d784e - Browse repository at this point
Copy the full SHA d9d784eView commit details -
A second plot is displayed underneath the 3d plot that shows a slice through a plane. If `plane` is not `nothing` in `tumorplot`, coordinates are projected into 2d. Controls are added to control orientation and offset of said plane, specifically: - text field for offset from origin (default: lattice midpoint) - +/- buttons to increment/decrement offset - buttons to orient in x,y,z direction and combinations thereof Imports are ordered alphabetically. LinearAlgebra is imported.
Configuration menu - View commit details
-
Copy full SHA for f697cbd - Browse repository at this point
Copy the full SHA f697cbdView commit details -
Restructure ColorMapping, simplyfy color_phylo
ColorMapping now stores a vector of root genotypes and a dictionary mapping every genotype to a color. color_phylo rebuilds the latter on every call, making sure that root genotypes get assigned the same color again. Change the default depth in color_phylo from 1 to 2. Remove `transition` keyword. To be introduced later again.
Configuration menu - View commit details
-
Copy full SHA for 45e3cce - Browse repository at this point
Copy the full SHA 45e3cceView commit details -
color_phylo is the default for coloring
Remove colormap as a coloring option.
Configuration menu - View commit details
-
Copy full SHA for 7c93303 - Browse repository at this point
Copy the full SHA 7c93303View commit details -
color_lineage colors the children of given root nodes. color_phylo is renamed to color_depth
Configuration menu - View commit details
-
Copy full SHA for 9abc34e - Browse repository at this point
Copy the full SHA 9abc34eView commit details -
New kwarg `default` to specify a fallback color if a genotype is not covered, e.g. because the root of the phylogeny isn't in `roots`. In-place version. Further: - Default palette is based on Julia blue. - min_colors only returns transparent for genotype 0.
Configuration menu - View commit details
-
Copy full SHA for d616789 - Browse repository at this point
Copy the full SHA d616789View commit details -
TumorInspector type and color settings
Have TumorInspector(...) return a struct containing the figure, subplots, color/plane/radius settings for programmatic manipulation. Introduce color settings. - Currently: color lineages and color inner. - Control panel for either option. Radius filter can be switched between = and <=
Configuration menu - View commit details
-
Copy full SHA for 8c9aea0 - Browse repository at this point
Copy the full SHA 8c9aea0View commit details -
Configuration menu - View commit details
-
Copy full SHA for d239cd8 - Browse repository at this point
Copy the full SHA d239cd8View commit details -
Configuration menu - View commit details
-
Copy full SHA for 7d76ccb - Browse repository at this point
Copy the full SHA 7d76ccbView commit details -
Note: When squashing combine with beb8f0d
Configuration menu - View commit details
-
Copy full SHA for e921432 - Browse repository at this point
Copy the full SHA e921432View commit details -
Due to a bug where a call to close(window) results in a segfault, the use of either button would frequently result in the application crashing. Close the window with the title bar controls.
Configuration menu - View commit details
-
Copy full SHA for f0ba862 - Browse repository at this point
Copy the full SHA f0ba862View commit details -
Configuration menu - View commit details
-
Copy full SHA for a391072 - Browse repository at this point
Copy the full SHA a391072View commit details -
* calculate markersize from neighbor distance * FCC vertex * GeometryBasics v0.4 * missing imports
Configuration menu - View commit details
-
Copy full SHA for 782117f - Browse repository at this point
Copy the full SHA 782117fView commit details -
Configuration menu - View commit details
-
Copy full SHA for 1840055 - Browse repository at this point
Copy the full SHA 1840055View commit details -
Configuration menu - View commit details
-
Copy full SHA for 82f90a5 - Browse repository at this point
Copy the full SHA 82f90a5View commit details -
Fixes accidental reversion of earlier compat changes.
Configuration menu - View commit details
-
Copy full SHA for feb347f - Browse repository at this point
Copy the full SHA feb347fView commit details
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.