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[MNT] ensure CI for python 3.8-3.10 runs on pandas 2 #4795

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merged 1 commit into from Jul 4, 2023
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[MNT] ensure CI for python 3.8-3.10 runs on pandas 2 #4795

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4 changes: 2 additions & 2 deletions .github/workflows/test.yml
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Expand Up @@ -186,7 +186,7 @@ jobs:
run: conda install -c anaconda libpython

- name: Install sktime and dependencies
run: python -m pip install .[all_extras,dev]
run: python -m pip install .[all_extras_pandas2,dev]

- name: Show dependencies
run: python -m pip list
Expand Down Expand Up @@ -220,7 +220,7 @@ jobs:

- name: Install sktime and dependencies
run: |
python -m pip install .[all_extras,dev] --no-cache-dir
python -m pip install .[all_extras_pandas2,dev] --no-cache-dir

- name: Show dependencies
run: python -m pip list
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4 changes: 2 additions & 2 deletions .github/workflows/wheels.yml
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Expand Up @@ -51,7 +51,7 @@ jobs:
run: echo "WHEELNAME=$(ls ./wheelhouse/sktime-*none-any.whl)" >> $GITHUB_ENV

- name: Install wheel and extras
run: python -m pip install "${{ env.WHEELNAME }}[all_extras,dev]"
run: python -m pip install "${{ env.WHEELNAME }}[all_extras_pandas2,dev]"

- name: Run tests
run: make test
Expand Down Expand Up @@ -115,7 +115,7 @@ jobs:
run: conda activate test

- name: Install wheel and extras
run: python -m pip install "${env:WHEELNAME}[all_extras,dev]"
run: python -m pip install "${env:WHEELNAME}[all_extras_pandas2,dev]"

- name: Show conda packages
run: conda list -n test
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32 changes: 32 additions & 0 deletions pyproject.toml
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Expand Up @@ -87,6 +87,38 @@ all_extras = [
"seasonal",
]

all_extras_pandas2 = [
"attrs",
"cloudpickle",
"dash!=2.9.0",
"dask",
"dtw-python",
"esig==0.9.7; python_version < '3.10'",
"filterpy>=1.4.5; python_version < '3.11'",
"h5py",
"hmmlearn>=0.2.7; python_version < '3.11'",
"gluonts>=0.9.0",
"keras-self-attention; python_version < '3.11'",
"kotsu>=0.3.1",
"matplotlib>=3.3.2",
"mne",
"numba>=0.53; python_version < '3.11'",
"pmdarima>=1.8.0,!=1.8.1,<3.0.0",
"prophet>=1.1",
"pykalman>=0.9.5; python_version < '3.11'",
"pyod>=0.8.0; python_version < '3.11'",
"scikit_posthocs>=0.6.5",
"seaborn>=0.11.0",
"statsmodels>=0.12.1",
"stumpy>=1.5.1; python_version < '3.11'",
"tbats>=1.1.0",
"tensorflow; python_version < '3.11'",
"tsfresh>=0.17.0",
"tslearn>=0.5.2; python_version < '3.11'",
"xarray",
"seasonal",
]

cython_extras = [
"mrsqm; python_version < '3.11'",
]
Expand Down