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Advanced options
Serghei Mangul edited this page May 9, 2016
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[Text here is in beta version. TO be updated soon]
ROP has advanced options to parallelize the ROP analysis by scheduling multiple computing jobs. More details about advances options are available here.
Currently this option is supported only for hoffman2 or similar cluster.
Read more about scheduling multiple computing jobs on hoffman2 here
ROP has advanced options to paralyze the analysis by scheduling multiple computing jobs.
Don’t let your unmapped reads go to waste
- Main
- About ROP Tutorial
- What is ROP?
- How ROP works?
- How to prepare unmapped reads
- How to customize tools used by ROP
- Unix Tutorial
- Get started
- Targeted analysis
- ROP analysis: one RNA-Seq sample
- How to run ROP for mouse
- ROP analysis via qsub
- ROP analysis of multiple samples via qsub array
- Immune profiling by ROP (ImReP)
- ImRep across multiple samples
- ROP input details
- ROP output details
- Source of every last read
- Additional options
- How to calculate immune diversity?
- How to run hyper editing pipeline?