forked from rocker-org/ml
-
Notifications
You must be signed in to change notification settings - Fork 0
/
Dockerfile
61 lines (40 loc) · 1.61 KB
/
Dockerfile
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
FROM nvidia/cuda:9.0-cudnn7-devel
LABEL org.label-schema.license="GPL-2.0" \
org.label-schema.vcs-url="https://github.com/rocker-org/rocker-versioned" \
org.label-schema.vendor="Rocker Project" \
maintainer="Carl Boettiger <cboettig@ropensci.org>"
ENV TERM=xterm
ENV CRAN=https://cran.rstudio.com
## cuda:9.0 is xenial, cuda:10.0 is bionic
ARG UBUNTU_VERSION=xenial
ARG R_HOME=/usr/lib/R
ARG DEBIAN_FRONTEND=noninteractive
ENV LC_ALL=en_US.UTF-8
ENV LANG=en_US.UTF-8
COPY shared/install_R.sh /tmp/install_R.sh
RUN . /tmp/install_R.sh
COPY 9.0/install_rstudio.sh /tmp/install_rstudio.sh
RUN . /tmp/install_rstudio.sh
COPY shared/userconf.sh /etc/cont-init.d/userconf
EXPOSE 8787
CMD ["/init"]
COPY shared/install_tidyverse.sh /tmp/install_tidyverse.sh
RUN . /tmp/install_tidyverse.sh
COPY shared/install_verse.sh /tmp/install_verse.sh
RUN . /tmp/install_verse.sh
## Use Configure CUDA for R, use NVidia libs for BLAS
ENV CUDA_HOME=/usr/local/cuda
ENV PATH=$PATH:$CUDA_HOME/bin
ENV LD_LIBRARY_PATH=$CUDA_HOME/lib64/libnvblas.so:$LD_LIBRARY_PATH:$CUDA_HOME/lib64:$CUDA_HOME/extras/CUPTI/lib64
ENV NVBLAS_CONFIG_FILE=/etc/nvblas.conf
COPY shared/config_R_cuda.sh /tmp/config_R_cuda.sh
RUN . /tmp/config_R_cuda.sh
ENV PYTHON_VENV_PATH=/opt/venv
ENV RETICULATE_PYTHON_ENV=$PYTHON_VENV_PATH
ENV PATH=${PYTHON_VENV_PATH}/bin:${PATH}
COPY shared/install_python.sh /tmp/install_python.sh
RUN . /tmp/install_python.sh
COPY shared/install_tensorflow-gpu.sh /tmp/install_tensorflow-gpu.sh
RUN . /tmp/install_tensorflow-gpu.sh
#COPY install_geospatial.sh /tmp/install_geospatial.sh
#RUN . /tmp/install_geospatial.sh