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fix: make get_snakefile return rel path to snakefile #40

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Apr 6, 2024
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fix: make get_snakefile return rel path to snakefile #40

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2 changes: 1 addition & 1 deletion snakemake_executor_plugin_googlebatch/executor.py
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Original file line number Diff line number Diff line change
Expand Up @@ -398,7 +398,7 @@ def get_snakefile(self):
Use a Snakefile in the present working directory since we write it.
"""
assert os.path.exists(self.workflow.main_snakefile)
return "Snakefile"
return os.path.relpath(self.workflow.main_snakefile, os.getcwd())

async def check_active_jobs(
self, active_jobs: List[SubmittedJobInfo]
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