Minor.

snakemake · Feb 17, 2017 · 212250a · 212250a
1 parent 04ceb1a
commit 212250a
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/bio/pindel/wrapper.py b/bio/pindel/wrapper.py
@@ -10,4 +10,4 @@
 log = snakemake.log_fmt_shell(stdout=True, stderr=True)
 prefix = os.path.dirname(snakemake.output[0])
 
-shell("pindel {snakemake.params} -i {snakemake.input.conf} -f {snakemake.input.ref} -o {prefix} {log}")
+shell("pindel {snakemake.params} -i {snakemake.input.config} -f {snakemake.input.ref} -o {prefix} {log}")