This section gives instructions on how to cite Snakemake and lists citing articles.
When using Snakemake for a publication, please cite the following article in you paper:
Another publication describing more of Snakemake internals:
And my PhD thesis which describes all algorithmic details:
If you publish a Snakemake workflow, consider to add this badge to your project page:
The markdown syntax is
text
[![Snakemake](https://img.shields.io/badge/snakemake-≥5.6.0-brightgreen.svg?style=flat)](https://snakemake.readthedocs.io)
Replace the 3.5.2
with the minimum required Snakemake version. You can also change the style.