Issues: snakemake/snakemake
Announcement: Snakemake 8.0 released, including the removal o...
#2409
opened Aug 15, 2023 by
johanneskoester
Open
21
Join the Snakemake discord server for user and dev exchange
#628
opened Sep 16, 2020 by
johanneskoester
Open
1
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keep_local
does not keep remote files locally
bug
#2844
opened Apr 24, 2024 by
Hugovdberg
ModuleNotFoundError: No module named 'asyncore'
bug
Something isn't working
#2841
opened Apr 24, 2024 by
PandengWang
incompatibility with using Something isn't working
rules.rulename.output
and importing snakefile as a module, using use rule a from somemodule as a with...
bug
#2838
opened Apr 23, 2024 by
LukaP-BB
Bind current working directory to container
enhancement
New feature or request
#2837
opened Apr 23, 2024 by
fgvieira
Error when using wrappers and Something isn't working
use rule as
bug
#2836
opened Apr 23, 2024 by
fgvieira
carbon footprint in report
enhancement
New feature or request
#2834
opened Apr 22, 2024 by
daaaaande
Incorrect shell command executed when defined within a loop.
bug
Something isn't working
#2832
opened Apr 21, 2024 by
ethan-shanahan
--cluster-config BsubInvocation Error
bug
Something isn't working
#2828
opened Apr 19, 2024 by
suhridbuddha
--show-failed-logs
if binary file used as log
file
bug
#2826
opened Apr 19, 2024 by
votti
Make --cores a forbidden parameter if an executor is used.
enhancement
New feature or request
#2821
opened Apr 18, 2024 by
sven0schuierer
Add possibility to provide empty default resources in a profile (as was possible with SnakeMake 7.x.x)
enhancement
New feature or request
#2820
opened Apr 18, 2024 by
sven0schuierer
Using option --drmaa_logs crashes snakemake
bug
Something isn't working
#2819
opened Apr 18, 2024 by
sven0schuierer
Services setup and teardown procedures with specific scripts and warmup time
enhancement
New feature or request
#2816
opened Apr 16, 2024 by
raffienficiaud
Snakemake 8.9.0 on a singularity slurm cluster combination error
#2808
opened Apr 13, 2024 by
tinu-t
software deployment conda confusion
bug
Something isn't working
#2807
opened Apr 12, 2024 by
pdimens
Split a report using Snakefile
enhancement
New feature or request
#2804
opened Apr 11, 2024 by
lucaz88
"module command not found" using Snakemake with Slurm
bug
Something isn't working
#2802
opened Apr 11, 2024 by
kevinrue
Shell comand within if-else statement do not print when use "--print-compilation" arguemnt
bug
Something isn't working
#2798
opened Apr 8, 2024 by
y9c
Duplicate Calls to log_handler in log-handler-script
bug
Something isn't working
#2797
opened Apr 6, 2024 by
Ash1One
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