Skip to content

Issues: snakemake/snakemake

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Author
Filter by author
Label
Filter by label
Use alt + click/return to exclude labels
or + click/return for logical OR
Projects
Filter by project
Milestones
Filter by milestone
Assignee
Filter by who’s assigned
Sort

Issues list

keep_local does not keep remote files locally bug Something isn't working
#2844 opened Apr 24, 2024 by Hugovdberg
ModuleNotFoundError: No module named 'asyncore' bug Something isn't working
#2841 opened Apr 24, 2024 by PandengWang
Bind current working directory to container enhancement New feature or request
#2837 opened Apr 23, 2024 by fgvieira
Error when using wrappers and use rule as bug Something isn't working
#2836 opened Apr 23, 2024 by fgvieira
question: SFTP options
#2835 opened Apr 22, 2024 by SanVerb
carbon footprint in report enhancement New feature or request
#2834 opened Apr 22, 2024 by daaaaande
--cluster-config BsubInvocation Error bug Something isn't working
#2828 opened Apr 19, 2024 by suhridbuddha
--show-failed-logs if binary file used as log file bug Something isn't working
#2826 opened Apr 19, 2024 by votti
--dry-run --quiet fails on 8 bug Something isn't working
#2825 opened Apr 18, 2024 by rueberger
--until not working with checkpoints bug Something isn't working
#2824 opened Apr 18, 2024 by nkt97
Incomplete DAG with checkpoints bug Something isn't working
#2822 opened Apr 18, 2024 by fgvieira
Using option --drmaa_logs crashes snakemake bug Something isn't working
#2819 opened Apr 18, 2024 by sven0schuierer
software deployment conda confusion bug Something isn't working
#2807 opened Apr 12, 2024 by pdimens
Split a report using Snakefile enhancement New feature or request
#2804 opened Apr 11, 2024 by lucaz88
"module command not found" using Snakemake with Slurm bug Something isn't working
#2802 opened Apr 11, 2024 by kevinrue
Duplicate Calls to log_handler in log-handler-script bug Something isn't working
#2797 opened Apr 6, 2024 by Ash1One
Working example for new version 8 API
#2792 opened Apr 3, 2024 by standage
snakemake function import error
#2791 opened Apr 3, 2024 by nicholasprice79
ProTip! no:milestone will show everything without a milestone.