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added DOIs to all references #124

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Jul 5, 2018
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added DOIs to all references #124

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25 changes: 18 additions & 7 deletions docs/source/refs.bib
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Original file line number Diff line number Diff line change
Expand Up @@ -6,7 +6,8 @@ @article{strimmer2008fdrtool
number={12},
pages={1461--1462},
year={2008},
publisher={Oxford University Press}
publisher={Oxford University Press},
DOI={10.1093/bioinformatics/btn209}
}

@article{siebert_soeding_2016,
Expand All @@ -29,7 +30,8 @@ @article{yevshin2016gtrd
journal={Nucleic Acids Res.},
pages={gkw951},
year={2016},
publisher={Oxford University Press}
publisher={Oxford University Press},
DOI={10.1093/nar/gkw951}
}

@article{khan2017jaspar,
Expand All @@ -40,13 +42,20 @@ @article{khan2017jaspar
number={D1},
pages={D260--D266},
year={2017},
publisher={Oxford University Press}
publisher={Oxford University Press},
DOI={10.1093/nar/gkx1126}
}


@article{hocomoco_2018,
title={HOCOMOCO: towards a complete collection of transcription factor binding models for human and mouse via large-scale ChIP-Seq analysis},
volume={46}, DOI={10.1093/nar/gkx1106}, number={D1}, journal={Nucleic Acids Res.}, author={Kulakovskiy, Ivan V and Vorontsov, Ilya E and Yevshin, Ivan S and Sharipov, Ruslan N and Fedorova, Alla D and Rumynskiy, Eugene I and Medvedeva, Yulia A and Magana-Mora, Arturo and Bajic, Vladimir B and Papatsenko, Dmitry A and et al.}, year={2018}, pages={D252?D259}}
title={HOCOMOCO: towards a complete collection of transcription factor binding models for human and mouse via large-scale ChIP-Seq analysis},
volume={46},
DOI={10.1093/nar/gkx1106},
number={D1},
journal={Nucleic Acids Res.},
author={Kulakovskiy, Ivan V and Vorontsov, Ilya E and Yevshin, Ivan S and Sharipov, Ruslan N and Fedorova, Alla D and Rumynskiy, Eugene I and Medvedeva, Yulia A and Magana-Mora, Arturo and Bajic, Vladimir B and Papatsenko, Dmitry A and et al.},
year={2018},
pages={D252--D259}}

@article{quinlan2010bedtools,
title={BEDTools: a flexible suite of utilities for comparing genomic features},
Expand All @@ -56,7 +65,8 @@ @article{quinlan2010bedtools
number={6},
pages={841--842},
year={2010},
publisher={Oxford University Press}
publisher={Oxford University Press},
DOI={10.1093/bioinformatics/btq033}
}

@article{quinlan2014bedtools,
Expand All @@ -65,7 +75,8 @@ @article{quinlan2014bedtools
journal={Current protocols in bioinformatics},
pages={11--12},
year={2014},
publisher={Wiley Online Library}
publisher={Wiley Online Library},
DOI={10.1002/0471250953.bi1112s47}
}

@article{kiesel2018bammserver,
Expand Down